High-content tripartite split-GFP cell-based assays to screen for modulators of small GTPase activation

J Cell Sci. 2018 Jan 8;131(1):jcs210419. doi: 10.1242/jcs.210419.

Abstract

The human Ras superfamily of small GTPases controls essential cellular processes such as gene expression and cell proliferation. As their deregulation is widely associated with human cancer, small GTPases and their regulatory proteins have become increasingly attractive for the development of novel therapeutics. Classical methods to monitor GTPase activation include pulldown assays that limit the analysis of GTP-bound form of proteins from cell lysates. Alternatively, live-cell FRET biosensors may be used to study GTPase activation dynamics in response to stimuli, but these sensors often require further optimization for high-throughput applications. Here, we describe a cell-based approach that is suitable to monitor the modulation of small GTPase activity in a high-content analysis. The assay relies on a genetically encoded tripartite split-GFP (triSFP) system that we integrated in an optimized cellular model to monitor modulation of RhoA and RhoB GTPases. Our results indicate the robust response of the reporter, allowing the interrogation of inhibition and stimulation of Rho activity, and highlight potential applications of this method to discover novel modulators and regulators of small GTPases and related protein-binding domains.

Keywords: Cell-based assays; GEF; GTPase activation; Guanine nucleotide exchange factor; High-content analysis; Protein–protein interaction; Split-GFP.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • GTP Phosphohydrolase Activators / metabolism
  • Genetic Vectors
  • Green Fluorescent Proteins / genetics
  • Green Fluorescent Proteins / metabolism*
  • Guanine Nucleotide Exchange Factors / metabolism
  • HEK293 Cells
  • High-Throughput Screening Assays*
  • Humans
  • Protein Binding
  • Protein Interaction Mapping / methods*
  • rhoA GTP-Binding Protein / metabolism
  • rhoB GTP-Binding Protein / metabolism

Substances

  • GTP Phosphohydrolase Activators
  • Guanine Nucleotide Exchange Factors
  • Green Fluorescent Proteins
  • rhoA GTP-Binding Protein
  • rhoB GTP-Binding Protein