Multi-view light-sheet imaging and tracking with the MaMuT software reveals the cell lineage of a direct developing arthropod limb

Elife. 2018 Mar 29:7:e34410. doi: 10.7554/eLife.34410.

Abstract

During development, coordinated cell behaviors orchestrate tissue and organ morphogenesis. Detailed descriptions of cell lineages and behaviors provide a powerful framework to elucidate the mechanisms of morphogenesis. To study the cellular basis of limb development, we imaged transgenic fluorescently-labeled embryos from the crustacean Parhyale hawaiensis with multi-view light-sheet microscopy at high spatiotemporal resolution over several days of embryogenesis. The cell lineage of outgrowing thoracic limbs was reconstructed at single-cell resolution with new software called Massive Multi-view Tracker (MaMuT). In silico clonal analyses suggested that the early limb primordium becomes subdivided into anterior-posterior and dorsal-ventral compartments whose boundaries intersect at the distal tip of the growing limb. Limb-bud formation is associated with spatial modulation of cell proliferation, while limb elongation is also driven by preferential orientation of cell divisions along the proximal-distal growth axis. Cellular reconstructions were predictive of the expression patterns of limb development genes including the BMP morphogen Decapentaplegic.

Keywords: Parhyale hawaiensis; amphipods; appendage development; cell lineage; crustaceans; developmental biology; limb morphogenesis; stem cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amphipoda / embryology*
  • Animals
  • Cell Lineage*
  • Computational Biology / methods*
  • Extremities / embryology*
  • Fluorescence
  • Genes, Reporter
  • Image Processing, Computer-Assisted / methods*
  • Morphogenesis*
  • Optical Imaging / methods*
  • Software
  • Spatio-Temporal Analysis
  • Staining and Labeling