Conformational plasticity of the intrinsically disordered protein ASR1 modulates its function as a drought stress-responsive gene

PLoS One. 2018 Aug 23;13(8):e0202808. doi: 10.1371/journal.pone.0202808. eCollection 2018.

Abstract

Plants in arid zones are constantly exposed to drought stress. The ASR protein family (Abscisic, Stress, Ripening) -a subgroup of the late embryogenesis abundant superfamily- is involved in the water stress response and adaptation to dry environments. Tomato ASR1, as well as other members of this family, is an intrinsically disordered protein (IDP) that functions as a transcription factor and a chaperone. Here we employed different biophysical techniques to perform a deep in vitro characterization of ASR1 as an IDP and showed how both environmental factors and in vivo targets modulate its folding. We report that ASR1 adopts different conformations such as α-helix or polyproline type II in response to environmental changes. Low temperatures and low pH promote the polyproline type II conformation (PII). While NaCl increases PII content and slightly destabilizes α-helix conformation, PEG and glycerol have an important stabilizing effect of α-helix conformation. The binding of Zn2+in the low micromolar range promotes α-helix folding, while extra Zn2+ results in homo-dimerization. The ASR1-DNA binding is sequence specific and dependent on Zn2+. ASR1 chaperone activity does not change upon the structure induction triggered by the addition of Zn2+. Furthermore, trehalose, which has no effect on the ASR1 structure by itself, showed a synergistic effect on the ASR1-driven heat shock protection towards the reporter enzyme citrate synthase (CS). These observations prompted the development of a FRET reporter to sense ASR1 folding in vivo. Its performance was confirmed in Escherichia coli under saline and osmotic stress conditions, representing a promising probe to be used in plant cells. Overall, this work supports the notion that ASR1 plasticity is a key feature that facilitates its response to drought stress and its interaction with specific targets.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cold Temperature
  • Droughts
  • Glycerol / metabolism
  • Hydrogen-Ion Concentration
  • Plant Proteins / chemistry*
  • Plant Proteins / metabolism*
  • Polyethylene Glycols / metabolism
  • Protein Binding
  • Protein Multimerization
  • Protein Structure, Secondary
  • Protein Unfolding
  • Solanum lycopersicum / growth & development*
  • Solanum lycopersicum / metabolism
  • Stress, Physiological*
  • Trehalose / metabolism
  • Zinc / metabolism

Substances

  • Asr1 protein, Lycopersicon esculentum
  • Plant Proteins
  • Polyethylene Glycols
  • Trehalose
  • Zinc
  • Glycerol

Grants and funding

This work was funded from the Universidad de Buenos Aires, Argentina website: http://www.uba.ar grant to N.D.I. #20020130100660BA, from theAgencia Nacional de Promocion Cientifica y Tenica, Argentina (http://www.agencia.mincyt.gob.ar) grant to N.D.I. PICT-2014-0502 and to M.M.R PICT-2013-1148. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.