Short-Term Mitochondrial Permeability Transition Pore Opening Modulates Histone Lysine Methylation at the Early Phase of Somatic Cell Reprogramming

Cell Metab. 2018 Dec 4;28(6):935-945.e5. doi: 10.1016/j.cmet.2018.08.001. Epub 2018 Aug 30.

Abstract

Reprogramming of somatic cells to induced pluripotent stem cells reconfigures chromatin modifications. Whether and how this process is regulated by signals originating in the mitochondria remain unknown. Here we show that the mitochondrial permeability transition pore (mPTP), a key regulator of mitochondrial homeostasis, undergoes short-term opening during the early phase of reprogramming and that this transient activation enhances reprogramming. In mouse embryonic fibroblasts, greater mPTP opening correlates with higher reprogramming efficiency. The reprogramming-promoting function of mPTP opening is mediated by plant homeodomain finger protein 8 (PHF8) demethylation of H3K9me2 and H3K27me3, leading to reduction in their occupancies at the promoter regions of pluripotency genes. mPTP opening increases PHF8 protein levels downstream of mitochondrial reactive oxygen species production and miR-101c and simultaneously elevates levels of PHF8's cofactor, α-ketoglutarate. Our findings represent a novel mitochondria-to-nucleus pathway in cell fate determination by mPTP-mediated epigenetic regulation.

Keywords: PHF8; histone lysine methylation; induced pluripotent stem cells; mitochondrial permeability transition pore; reprogramming.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cellular Reprogramming*
  • Fibroblasts / metabolism*
  • HEK293 Cells
  • Histone Demethylases / metabolism*
  • Histones / metabolism*
  • Humans
  • Ketoglutaric Acids / metabolism
  • Lysine / metabolism*
  • Methylation
  • Mice
  • Mice, Inbred C57BL
  • MicroRNAs / metabolism
  • Mitochondria / metabolism*
  • Mitochondrial Membrane Transport Proteins / physiology*
  • Mitochondrial Membranes / metabolism*
  • Mitochondrial Permeability Transition Pore
  • Mouse Embryonic Stem Cells / metabolism*
  • Reactive Oxygen Species / metabolism
  • Transcription Factors / metabolism*

Substances

  • Histones
  • Ketoglutaric Acids
  • MIRN101 microRNA, mouse
  • MicroRNAs
  • Mitochondrial Membrane Transport Proteins
  • Mitochondrial Permeability Transition Pore
  • Reactive Oxygen Species
  • Transcription Factors
  • Histone Demethylases
  • PHF8 protein, mouse
  • Lysine