Compressed sensing acceleration of biexponential 3D-T relaxation mapping of knee cartilage

Magn Reson Med. 2019 Feb;81(2):863-880. doi: 10.1002/mrm.27416. Epub 2018 Sep 19.

Abstract

Purpose: Use compressed sensing (CS) for 3D biexponential spin-lattice relaxation time in the rotating frame (T ) mapping of knee cartilage, reducing the total scan time and maintaining the quality of estimated biexponential T parameters (short and long relaxation times and corresponding fractions) comparable to fully sampled scans.

Methods: Fully sampled 3D-T -weighted data sets were retrospectively undersampled by factors 2-10. CS reconstruction using 12 different sparsifying transforms were compared for biexponential T -mapping of knee cartilage, including temporal and spatial wavelets and finite differences, dictionary from principal component analysis (PCA), k-means singular value decomposition (K-SVD), exponential decay models, and also low rank and low rank plus sparse models. Synthetic phantom (N = 6) and in vivo human knee cartilage data sets (N = 7) were included in the experiments. Spatial filtering before biexponential T parameter estimation was also tested.

Results: Most CS methods performed satisfactorily for an acceleration factor (AF) of 2, with relative median normalized absolute deviation (MNAD) around 10%. Some sparsifying transforms, such as low rank with spatial finite difference (L + S SFD), spatiotemporal finite difference (STFD), and exponential dictionaries (EXP) significantly improved this performance, reaching MNAD below 15% with AF up to 10, when spatial filtering was used.

Conclusion: Accelerating biexponential 3D-T mapping of knee cartilage with CS is feasible. The best results were obtained by STFD, EXP, and L + S SFD regularizers combined with spatial prefiltering. These 3 CS methods performed satisfactorily on synthetic phantom as well as in vivo knee cartilage for AFs up to 10, with median error below 15%.

Keywords: T1ρ relaxation; biexponential model; compressed sensing; low rank; sparse reconstruction.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Acceleration
  • Adult
  • Algorithms
  • Cartilage, Articular / diagnostic imaging*
  • Healthy Volunteers
  • Humans
  • Image Processing, Computer-Assisted / methods*
  • Imaging, Three-Dimensional
  • Knee / diagnostic imaging
  • Knee Joint / diagnostic imaging*
  • Magnetic Resonance Imaging / methods*
  • Osteoarthritis, Knee / diagnostic imaging
  • Phantoms, Imaging
  • Principal Component Analysis
  • Retrospective Studies
  • Young Adult