PEC-GRAPPA reconstruction of simultaneous multislice EPI with slice-dependent 2D Nyquist ghost correction

Magn Reson Med. 2019 Mar;81(3):1924-1934. doi: 10.1002/mrm.27546. Epub 2018 Oct 12.

Abstract

Purpose: To provide simultaneous multislice (SMS) EPI reconstruction with k-space implementation and robust Nyquist ghost correction.

Methods: 2D phase error correction SENSE (PEC-SENSE) was recently developed for Nyquist ghost correction in SMS EPI reconstruction for which virtual coil simultaneous autocalibration and k-space estimation (VC-SAKE) was used to remove slice-dependent Nyquist ghosts and intershot 2D phase variations in multi-shot EPI reference scan. However, masking coil sensitivity maps to exclude background region in PEC-SENSE and manually selecting slice-wise target ranks in VC-SAKE are cumbersome procedures in practice. To avoid masking, the concept of PEC-SENSE is extended to k-space implementation and termed as PEC-GRAPPA. Furthermore, a singular value shrinkage scheme is incorporated in VC-SAKE to circumvent the empirical slice-wise target rank selection. PEC-GRAPPA was evaluated and compared to PEC-SENSE with/without masking and 1D linear phase correction GRAPPA.

Results: PEC-GRAPPA robustly reconstructed SMS EPI images from 7T phantom and human brain data, effectively removing the phase error-induced artifacts. The resulting residual artifact level and temporal SNR were comparable to those by PEC-SENSE with careful tuning. PEC-GRAPPA outperformed PEC-SENSE without masking and 1D linear phase correction GRAPPA.

Conclusion: Our proposed PEC-GRAPPA approach effectively removes the artifacts caused by Nyquist ghosts in SMS EPI without cumbersome tuning. This approach provides a robust and practical implementation of SMS EPI reconstruction in k-space with slice-dependent 2D Nyquist ghost correction.

Keywords: EPI; GRAPPA; Nyquist ghost; SMS; multiband; parallel imaging.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Artifacts
  • Brain / diagnostic imaging*
  • Calibration
  • Echo-Planar Imaging*
  • Healthy Volunteers
  • Humans
  • Image Enhancement / methods*
  • Image Processing, Computer-Assisted
  • Phantoms, Imaging
  • Reference Values
  • Signal Processing, Computer-Assisted
  • Signal-To-Noise Ratio
  • Time Factors