Butyricimonas faecalis sp. nov., isolated from human faeces and emended description of the genus Butyricimonas

Int J Syst Evol Microbiol. 2019 Mar;69(3):833-838. doi: 10.1099/ijsem.0.003249. Epub 2019 Feb 1.

Abstract

A Gram-negative, strictly anaerobic, non-spore forming, non-motile, non-pigmented bacterial strain, designated H184T, was isolated from human faeces. 16S rRNA gene sequence analysis showed that strain H184T represents a member of the genus Butyricimonas. Strain H184T is related to but distinct from Butyricimonasvirosa JCM 15149T and Butyricimonasparavirosa JCM 18677T, with 16S rRNA gene sequence similarities of 96.32 and 96.24 %, respectively. Strain H184T shared 90.50 % hsp60 gene sequence similarity to B. virosa JCM 15149T and B. paravirosa JCM 18677T. Growth occurs between 25 and 42 °C with an optimum at 37 °C. Bile and NaCl concentration range allowing growth are 0-3.75 % and 0-1.8 %, respectively. pH range for growth is 5.5-8. The strain produced propionate as the major end product from glucose. The major cellular fatty acids of strain H184T were iso-C15 : 0 (63.5 %) and iso-C17 : 0 3-OH (12.8%). The major menaquinone of the strain was MK-10 (86 %). DNA G+C content of the isolate H184T was 44.2 mol%. The genome-based comparison between strain H184T and B. virosa JCM 15149T by pairwise average nucleotide identity indicated a clear distinction with a score of 87.22. On the basis of these data, strain H184T represents a novel species of the genus Butyricimonas, for which the name Butyricimonas faecalis sp. nov. is proposed. The type strain of B. faecalis is H184T (DSM 106867T, LMG 30602T).

Keywords: Butyricimonas; human faeces; human intestinal microbiota; porphyromonadaceae.

MeSH terms

  • Adult
  • Bacteria, Anaerobic / classification
  • Bacteria, Anaerobic / isolation & purification
  • Bacterial Typing Techniques
  • Bacteroidetes / classification*
  • Bacteroidetes / isolation & purification
  • Base Composition
  • Belgium
  • DNA, Bacterial / genetics
  • Fatty Acids / chemistry
  • Feces / microbiology*
  • Female
  • Humans
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Vitamin K 2 / chemistry

Substances

  • DNA, Bacterial
  • Fatty Acids
  • RNA, Ribosomal, 16S
  • Vitamin K 2