Virulence-related genes are associated with clinical and nutritional outcomes of Shigella/Enteroinvasive Escherichia coli pathotype infection in children from Brazilian semiarid region: A community case-control study

Int J Med Microbiol. 2019 Mar;309(2):151-158. doi: 10.1016/j.ijmm.2019.01.003. Epub 2019 Jan 31.

Abstract

Shigella/Enteroinvasive Escherichia coli (EIEC) pathotype is a major enteropathogen associated with diarrhea and malnutrition in children from developing countries. This study aimed to correlate Shigella/EIEC virulence-related genes (VRGs) with clinical symptoms, nutritional status and coenteropathogens in children from the Brazilian semiarid region. We designed a case-control study of community diarrhea in six cities of the Brazil semiarid region with 1200 children aging 2-36 months. Standardized questionnaire was applied for collecting sociodemographic, nutritional status and clinical information of the children. DNA samples were extracted from stools and diagnosed for Shigella/EIEC using PCR-based approaches. Positive samples were tested for 28 VRGs using four multiplex PCRs. Intestinal inflammation was determined by measuring fecal myeloperoxidase (MPO). Shigella/EIEC pathotype was detected in 5% of the children and was significantly associated with diarrhea. The genes sen (encoding Shigella enterotoxin 2), ipgB2, ipgB1 (both encoding type 3 secretion system-T3SS effectors that modulate actin filament), and ospF (encoding a T3SS effector involved in suppression of host responses) were further associated with diarrhea in Shigella/EIEC positive children. Among children presenting diarrhea, virA gene (encoding a T3SS effector that promotes microtubule destabilization) was associated with fever, while virB (encoding a major transcriptional activator) was associated with low height-for-age z-score. In addition, these VRGs were associated with increased fecal MPO, and coinfection with Salmonella spp. was associated with increased abdominal pain. These data reinforce the impact of Shigella/EIEC on diarrhea in children from Brazilian semiarid region and highlighted the contributions of specific virulence genes for its pathobiology.

Keywords: Child diarrhea; Shigella/EIEC pathotype; Virulence genes.

MeSH terms

  • Brazil / epidemiology
  • Case-Control Studies
  • Child, Preschool
  • Cities / epidemiology
  • Cross-Sectional Studies
  • Desert Climate
  • Diarrhea / epidemiology
  • Diarrhea / microbiology
  • Diarrhea / pathology*
  • Dysentery, Bacillary / epidemiology
  • Dysentery, Bacillary / microbiology
  • Dysentery, Bacillary / pathology*
  • Escherichia coli / genetics
  • Escherichia coli / isolation & purification*
  • Escherichia coli / pathogenicity
  • Escherichia coli Infections / epidemiology
  • Escherichia coli Infections / microbiology
  • Escherichia coli Infections / pathology*
  • Female
  • Genes, Bacterial
  • Humans
  • Infant
  • Male
  • Malnutrition / epidemiology
  • Malnutrition / microbiology
  • Malnutrition / pathology*
  • Polymerase Chain Reaction
  • Shigella / genetics
  • Shigella / isolation & purification*
  • Shigella / pathogenicity
  • Surveys and Questionnaires
  • Treatment Outcome
  • Virulence Factors / genetics*

Substances

  • Virulence Factors