[Comparative analysis of post-translational modifications in plasma proteome of patients with cerebral ischemia based on HPLC-MS/MS method]

Biomed Khim. 2019 Apr;65(3):251-258. doi: 10.18097/PBMC20196503251.
[Article in Russian]

Abstract

The relative differences between post-translational modifications (PTM) of proteins in blood plasma samples of patients with cerebral ischemia (CI) and healthy people were investigated using of the method of label-free comparative proteomic analysis based on the technology of tandem HPLC-MS/MS. For PTM detection we used multiple MS/MS search in the database Mascot for variable PTM and Progenesis LS-MS software. In the CI plasma samples, we observed an increase in the proportion of peptides with such PTM as phosphorylation of serine, threonine, and tyrosine, acetylation of lysine and protein N-term, ubiquitination of lysine and deamidation of glutamine related to clinically significant processes were revealed.

Issledovany otnositel'nye razlichiia posttransliatsionnykh modifikatsiĭ (PTM) belkov v obraztsakh plazmy krovi bol'nykh tserebral'noĭ ishemieĭ (TsI) i zdorovykh liudeĭ na osnove metoda sravnitel'nogo bezmetkovogo proteomnogo analiza na baze tekhnologii tandemnoĭ VÉZhKh-MS/MS. Dlia obnaruzheniia PTM byl vypolnen mnozhestvennyĭ poisk MS/MS v baze dannykh Mascot s ustanovlennoĭ peremennoĭ PTM s ispol'zovaniem programmnogo obespecheniia Progenesis LS-MS. V plazme bol'nykh TsI nabliudali uvelichenie doli posttransliatsionno-modifitsirovannykh peptidov. Vyiavleny takie PTM belkov, kak fosforilirovanie ostatkov serina, treonina i tirozina, atsetilirovanie ostatkov lizina i N-kontsevoe atsetilirovanie, ubikvitinirovanie ostatkov lizina i dezamidirovanie ostatkov glutamina i asparagina, imeiushchie otnoshenie k klinicheski znachimym protsessam.

Keywords: Liquid Chromatography and Mass Spectrometry; blood plasma proteome; cerebral ischemia; post-translational modifications of proteins.

Publication types

  • Comparative Study

MeSH terms

  • Brain Ischemia / blood*
  • Chromatography, High Pressure Liquid
  • Humans
  • Protein Processing, Post-Translational*
  • Proteome*
  • Proteomics
  • Tandem Mass Spectrometry

Substances

  • Proteome