Genome-wide localization of the polyphenol quercetin in human monocytes

BMC Genomics. 2019 Jul 23;20(1):606. doi: 10.1186/s12864-019-5966-9.

Abstract

Background: Quercetin is a polyphenol of great interest given its antioxidant activity and involvement in the immune response. Although quercetin has been well studied at the molecular level as a gene regulator and an activator of specific cellular pathways, not much attention has been given to its mechanism of action at the genome-wide level. The present study aims to characterize quercetin's interaction with cellular DNA and to show its subsequent effect on downstream transcription.

Results: Two massive parallel DNA-sequencing technologies were used: Chem-seq and RNA-seq. We demonstrate that upon binding to DNA or genome-associated proteins, quercetin acts as a cis-regulatory transcription factor for the expression of genes that are involved in the cell cycle, differentiation and development.

Conclusions: Such findings could provide new and important insights into the mechanisms by which the dietary polyphenol quercetin influences cellular functions.

Keywords: Anticancer; Chem-seq; Polyphenol; Quercetin; RNA-seq.

MeSH terms

  • Cell Cycle Proteins / genetics
  • Cell Differentiation
  • DNA
  • Gene Expression Regulation / drug effects*
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Monocytes / cytology*
  • Quercetin / pharmacology*
  • Transcription Factors

Substances

  • Cell Cycle Proteins
  • Transcription Factors
  • DNA
  • Quercetin