Precocious neuronal differentiation and disrupted oxygen responses in Kabuki syndrome

JCI Insight. 2019 Oct 17;4(20):e129375. doi: 10.1172/jci.insight.129375.

Abstract

Chromatin modifiers act to coordinate gene expression changes critical to neuronal differentiation from neural stem/progenitor cells (NSPCs). Lysine-specific methyltransferase 2D (KMT2D) encodes a histone methyltransferase that promotes transcriptional activation and is frequently mutated in cancers and in the majority (>70%) of patients diagnosed with the congenital, multisystem intellectual disability disorder Kabuki syndrome 1 (KS1). Critical roles for KMT2D are established in various non-neural tissues, but the effects of KMT2D loss in brain cell development have not been described. We conducted parallel studies of proliferation, differentiation, transcription, and chromatin profiling in KMT2D-deficient human and mouse models to define KMT2D-regulated functions in neurodevelopmental contexts, including adult-born hippocampal NSPCs in vivo and in vitro. We report cell-autonomous defects in proliferation, cell cycle, and survival, accompanied by early NSPC maturation in several KMT2D-deficient model systems. Transcriptional suppression in KMT2D-deficient cells indicated strong perturbation of hypoxia-responsive metabolism pathways. Functional experiments confirmed abnormalities of cellular hypoxia responses in KMT2D-deficient neural cells and accelerated NSPC maturation in vivo. Together, our findings support a model in which loss of KMT2D function suppresses expression of oxygen-responsive gene programs important to neural progenitor maintenance, resulting in precocious neuronal differentiation in a mouse model of KS1.

Keywords: Adult stem cells; Epigenetics; Genetics; Neurological disorders; Neuroscience.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Abnormalities, Multiple / genetics*
  • Abnormalities, Multiple / pathology
  • Animals
  • Brain / cytology
  • Brain / growth & development*
  • Cell Differentiation / genetics*
  • Cell Hypoxia / genetics
  • Cell Proliferation / genetics
  • Chromatin / metabolism
  • DNA-Binding Proteins / deficiency*
  • DNA-Binding Proteins / genetics
  • Disease Models, Animal
  • Face / abnormalities*
  • Face / pathology
  • Female
  • Fibroblasts
  • Hematologic Diseases / genetics*
  • Hematologic Diseases / pathology
  • Histone-Lysine N-Methyltransferase / deficiency*
  • Histone-Lysine N-Methyltransferase / genetics
  • Humans
  • Induced Pluripotent Stem Cells
  • Male
  • Mice
  • Mutation
  • Myeloid-Lymphoid Leukemia Protein / deficiency*
  • Myeloid-Lymphoid Leukemia Protein / genetics
  • Neoplasm Proteins / deficiency*
  • Neoplasm Proteins / genetics
  • Neural Stem Cells / pathology*
  • Neurons / pathology*
  • Oxygen / metabolism
  • Primary Cell Culture
  • RNA-Seq
  • Single-Cell Analysis
  • Skin / cytology
  • Skin / pathology
  • Vestibular Diseases / genetics*
  • Vestibular Diseases / pathology

Substances

  • Chromatin
  • DNA-Binding Proteins
  • KMT2D protein, human
  • Neoplasm Proteins
  • Myeloid-Lymphoid Leukemia Protein
  • Histone-Lysine N-Methyltransferase
  • Kmt2b protein, mouse
  • Oxygen

Supplementary concepts

  • Kabuki syndrome