Precise estimation of renal vascular dominant regions using spatially aware fully convolutional networks, tensor-cut and Voronoi diagrams

Comput Med Imaging Graph. 2019 Oct:77:101642. doi: 10.1016/j.compmedimag.2019.101642. Epub 2019 Aug 19.

Abstract

This paper presents a new approach for precisely estimating the renal vascular dominant region using a Voronoi diagram. To provide computer-assisted diagnostics for the pre-surgical simulation of partial nephrectomy surgery, we must obtain information on the renal arteries and the renal vascular dominant regions. We propose a fully automatic segmentation method that combines a neural network and tensor-based graph-cut methods to precisely extract the kidney and renal arteries. First, we use a convolutional neural network to localize the kidney regions and extract tiny renal arteries with a tensor-based graph-cut method. Then we generate a Voronoi diagram to estimate the renal vascular dominant regions based on the segmented kidney and renal arteries. The accuracy of kidney segmentation in 27 cases with 8-fold cross validation reached a Dice score of 95%. The accuracy of renal artery segmentation in 8 cases obtained a centerline overlap ratio of 80%. Each partition region corresponds to a renal vascular dominant region. The final dominant-region estimation accuracy achieved a Dice coefficient of 80%. A clinical application showed the potential of our proposed estimation approach in a real clinical surgical environment. Further validation using large-scale database is our future work.

Keywords: Blood vessel segmentation; Fully convolutional networks; Kidney segmentation; Voronoi diagram.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arteries / anatomy & histology*
  • Deep Learning
  • Humans
  • Image Processing, Computer-Assisted
  • Kidney / blood supply*
  • Nephrectomy
  • Neural Networks, Computer*
  • Tomography, X-Ray Computed*