Self-organization of parS centromeres by the ParB CTP hydrolase

Science. 2019 Nov 29;366(6469):1129-1133. doi: 10.1126/science.aay3965. Epub 2019 Oct 24.

Abstract

ParABS systems facilitate chromosome segregation and plasmid partitioning in bacteria and archaea. ParB protein binds centromeric parS DNA sequences and spreads to flanking DNA. We show that ParB is an enzyme that hydrolyzes cytidine triphosphate (CTP) to cytidine diphosphate (CDP). parS DNA stimulates cooperative CTP binding by ParB and CTP hydrolysis. A nucleotide cocrystal structure elucidates the catalytic center of the dimerization-dependent ParB CTPase. Single-molecule imaging and biochemical assays recapitulate features of ParB spreading from parS in the presence but not absence of CTP. These findings suggest that centromeres assemble by self-loading of ParB DNA sliding clamps at parS ParB CTPase is not related to known nucleotide hydrolases and might be a promising target for developing new classes of antibiotics.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacillus subtilis / enzymology*
  • Bacillus subtilis / genetics
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Centromere / enzymology*
  • Cytidine Triphosphate / chemistry*
  • Helix-Turn-Helix Motifs
  • Hydrolysis
  • Inverted Repeat Sequences
  • Protein Domains
  • Protein Multimerization
  • Pyrophosphatases / chemistry*
  • Pyrophosphatases / genetics

Substances

  • Bacterial Proteins
  • chromosome partition proteins, bacterial
  • Cytidine Triphosphate
  • CTPase
  • Pyrophosphatases