Plasma circular RNA panel acts as a novel diagnostic biomarker for colorectal cancer

Clin Biochem. 2019 Dec:74:60-68. doi: 10.1016/j.clinbiochem.2019.10.012. Epub 2019 Oct 26.

Abstract

Background: Colorectal cancer (CRC) is one of the most common cancers worldwide, and emerging lines of evidence have implicated circular RNAs (circRNAs), a novel class of endogenous noncoding RNAs, in CRC development. However, whether plasma circRNAs might be novel diagnostic biomarkers for CRC remains unclear.

Methods: We investigated the plasma levels of selected circRNAs by quantitative real-time PCR (qRT-PCR). The presence of the candidate circRNAs was confirmed through RNase R assays, qRT-PCR and DNA sequencing, and their diagnostic value was evaluated using a receiver operating characteristic (ROC) curve.

Results: The plasma levels of three circRNAs (circ-CCDC66, circ-ABCC1 and circ-STIL) were significantly decreased in CRC patients (n = 45) compared with healthy controls (n = 61). The ROC curve analysis showed that the area under the ROC curve (AUC) of the three-circRNA panel was 0.780, which is higher than that of traditional protein biomarkers, such as carcinoembryonic antigen (CEA) and carbohydrate antigen 19-9 (CA19-9). Combining the circRNA panel with CEA and CA19-9 might improve the ability to diagnose CRC (AUC = 0.855). In addition, the plasma circ-ABCC1 level was related to tumor growth and progression, and the plasma circ-CCDC66 and circ-ABCC1 levels were decreased in precursor lesions of CRC, including colon adenomas and adenomatous polyps. More importantly, circ-CCDC66 and circ-STIL were found to be useful for diagnosing early-stage CRC, and the three-circRNA panel improved the ability to diagnose CEA-negative and CA19-9-negative CRC.

Conclusion: Our study provides the first identification of a panel of three plasma circRNAs that could serve as a novel and independent diagnostic biomarker for CRC.

Keywords: Biomarker; CRC; Circ-ABCC1; Circ-CCDC66; Circ-STIL; Circular RNAs.

MeSH terms

  • Adenoma / blood
  • Adenomatous Polyps / blood
  • Aged
  • Antigens, Tumor-Associated, Carbohydrate / blood
  • Biomarkers, Tumor / blood*
  • Biomarkers, Tumor / genetics
  • Carcinoembryonic Antigen / blood
  • Cohort Studies
  • Colonic Neoplasms / blood
  • Colorectal Neoplasms / blood*
  • Colorectal Neoplasms / diagnosis*
  • Early Detection of Cancer
  • Female
  • Humans
  • Logistic Models
  • Lymphatic Metastasis
  • Male
  • Middle Aged
  • Neoplasm Staging
  • RNA, Circular / blood*
  • RNA, Circular / genetics
  • ROC Curve
  • Real-Time Polymerase Chain Reaction
  • Sequence Analysis, DNA

Substances

  • Antigens, Tumor-Associated, Carbohydrate
  • Biomarkers, Tumor
  • Carcinoembryonic Antigen
  • RNA, Circular
  • carbohydrate antigen 199, human