Kinetic analysis of amino acid radicals formed in H2O2-driven CuI LPMO reoxidation implicates dominant homolytic reactivity

Proc Natl Acad Sci U S A. 2020 Jun 2;117(22):11916-11922. doi: 10.1073/pnas.1922499117. Epub 2020 May 15.

Abstract

Lytic polysaccharide monooxygenases (LPMOs) have been proposed to react with both [Formula: see text] and [Formula: see text] as cosubstrates. In this study, the [Formula: see text] reaction with reduced Hypocrea jecorina LPMO9A (CuI-HjLPMO9A) is demonstrated to be 1,000-fold faster than the [Formula: see text] reaction while producing the same oxidized oligosaccharide products. Analysis of the reactivity in the absence of polysaccharide substrate by stopped-flow absorption and rapid freeze-quench (RFQ) electron paramagnetic resonance (EPR) and magnetic circular dichroism (MCD) yields two intermediates corresponding to neutral tyrosyl and tryptophanyl radicals that are formed along minor reaction pathways. The dominant reaction pathway is characterized by RFQ EPR and kinetic modeling to directly produce CuII-HjLPMO9A and indicates homolytic O-O cleavage. Both optical intermediates exhibit magnetic exchange coupling with the CuII sites reflecting facile electron transfer (ET) pathways, which may be protective against uncoupled turnover or provide an ET pathway to the active site with substrate bound. The reactivities of nonnative organic peroxide cosubstrates effectively exclude the possibility of a ping-pong mechanism.

Keywords: biofuels; kinetics; tryptophan radical; tyrosine radical.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Amino Acids / metabolism*
  • Binding Sites
  • Biofuels
  • Electron Spin Resonance Spectroscopy / methods
  • Hydrogen Peroxide / metabolism*
  • Hypocrea / metabolism
  • Kinetics
  • Magnetic Resonance Spectroscopy / methods
  • Mixed Function Oxygenases / chemistry*
  • Mixed Function Oxygenases / metabolism
  • Oxidation-Reduction
  • Peroxides / metabolism
  • Polysaccharides / metabolism*
  • Tryptophan / metabolism
  • Tyrosine / metabolism

Substances

  • Amino Acids
  • Biofuels
  • Peroxides
  • Polysaccharides
  • Tyrosine
  • Tryptophan
  • Hydrogen Peroxide
  • Mixed Function Oxygenases