YAP1-NUTM1 Gene Fusion in Porocarcinoma of the External Auditory Canal

Head Neck Pathol. 2020 Dec;14(4):982-990. doi: 10.1007/s12105-020-01173-9. Epub 2020 May 20.

Abstract

Gene fusions involving the NUTM1 gene (NUT) represent defining genetic markers of a highly aggressive carcinoma type with predilection for the midline structures of children and young adults, hence the original description as NUT midline carcinoma. Recent studies have increasingly documented involvement of the NUTM1 gene in the pathogenesis of other entities as well. We herein describe two cases of auditory canal carcinomas with features of porocarcinoma, both harboring a newly described YAP1-NUTM1 gene fusion. Patients were males aged 28 and 82 years who presented with slowly growing lesions in the external auditory canal. Histologic examination showed monomorphic basaloid and squamoid cells arranged into organoid solid aggregates, nests, ducts, small cysts, and focal pseudocribriform pattern with variable mitotic activity, infiltrative growth, and focal squamous differentiation, particularly in the most superficial part of the tumor. Immunohistochemistry revealed consistent reactivity for CK5, p63 and SOX10 and diffuse aberrant expression of TP53. CK7 expression was limited to a few luminal ductal cells. The androgen receptor and S100 were negative. Next generation sequencing (TruSight RNA fusion panel, Illumina) revealed the same YAP1-NUTM1 gene fusion in both tumors, which was subsequently confirmed by NUT-FISH and the monoclonal anti-NUT antibody. These cases represent a novel contribution to the spectrum of NUT-rearranged head and neck malignancies. This adnexal carcinoma variant should not be confused with the highly lethal NUT carcinoma based on NUT immunoreactivity alone.

Keywords: Auditory canal; Ear; Head and neck; Midline carcinoma; NUT carcinoma; NUTM1; YAP1.

Publication types

  • Case Reports

MeSH terms

  • Adaptor Proteins, Signal Transducing / genetics*
  • Adult
  • Aged, 80 and over
  • Ear Canal / pathology
  • Ear Neoplasms / genetics*
  • Eccrine Porocarcinoma / genetics*
  • Humans
  • Male
  • Neoplasm Proteins / genetics*
  • Nuclear Proteins / genetics*
  • Oncogene Fusion
  • Oncogene Proteins, Fusion / genetics
  • Sweat Gland Neoplasms / genetics*
  • Transcription Factors / genetics*
  • YAP-Signaling Proteins

Substances

  • Adaptor Proteins, Signal Transducing
  • NUTM1 protein, human
  • Neoplasm Proteins
  • Nuclear Proteins
  • Oncogene Proteins, Fusion
  • Transcription Factors
  • YAP-Signaling Proteins
  • YAP1 protein, human