[Targeting Cullin-RING E3 ligases for anti-cancer therapy: efforts on drug discovery]

Zhejiang Da Xue Xue Bao Yi Xue Ban. 2020 May 25;49(1):1-19. doi: 10.3785/j.issn.1008-9292.2020.02.21.
[Article in Chinese]

Abstract

Cullin-RING E3 ligases (CRLs) are the major components of ubiquitin-proteasome system, responsible for ubiquitylation and subsequent degradation of thousands of cellular proteins. CRLs play vital roles in the regulation of multiple cellular processes, including cell cycle, cell apoptosis, DNA replication, signalling transduction among the others, and are frequently dysregulated in many human cancers. The discovery of specific neddylation inhibitors, represented by MLN4924, has validated CRLs as promising targets for anti-cancer therapies with a growing market. Recent studies have focused on the discovery of the CRLs inhibitors by a variety of approaches, including high through-put screen, virtual screen or structure-based drug design. The field is, however, still facing the major challenging, since CRLs are a large multi-unit protein family without typical active pockets to facilitate the drug design, and enzymatic activity is mainly dependent on undruggable protein-protein interactions and dynamic conformation changes. Up to now, most reported CRLs inhibitors are aiming at targeting the F-box family proteins (e.g., SKP2, β-TrCP and FBXW7), the substrate recognition subunit of SCF E3 ligases. Other studies reported few small molecule inhibitors targeting the UBE2M-DCN1 interaction, which specifically inhibits CRL3/CRL1 by blocking the cullin neddylation. On the other hand, several CRL activators have been reported, such as plant auxin and immunomodulatory imide drugs, thalidomide. Finally, proteolysis-targeting chimeras (PROTACs) has emerged as a new technology in the field of drug discovery, specifically targeting the undruggable protein-protein interaction. The technique connects the small molecule that selectively binds to a target protein to a CRL E3 via a chemical linker to trigger the degradation of target protein. The PROTAC has become a hotspot in the field of E3-ligase-based anti-cancer drug discovery.

Cullin-RING E3泛素连接酶(CRL)是泛素-蛋白酶体系统的重要组分,参与催化蛋白质的泛素化,促进随后的蛋白质降解,从而影响细胞周期、细胞凋亡、DNA复制、信号转导等多种细胞生理活动,且在多种肿瘤细胞中异常活化。以MLN4924为代表的拟素化抑制剂的成功研发有力地证实了CRL是可行的抗肿瘤靶点,具有很好的药物研发潜力。近年来,不断有新的研究通过高通量筛选、基于计算机辅助的虚拟筛选或基于结构的药物设计技术寻找特异的CRL抑制剂,但由于CRL复合物具有多种亚单位,呈蛋白-蛋白相互作用和多变的蛋白构象,缺乏典型的小分子药物结合位点等特性,其相关药物研发仍面临巨大挑战。截至目前,CRL小分子抑制剂主要以研究最为透彻的SCF泛素连接酶复合体的底物识别亚基F-box蛋白家族为靶点。此外,也发现数个通过靶向UBE2M-DCN1相互作用,特异性阻断CRL3/CRL1拟素化,从而抑制CRL3/CRL1泛素连接酶活性的小分子化合物。另一方面,也有CRL激动剂的报道,主要见于植物生长素吲哚乙酸和免疫调节性酰亚胺类药物。此外,靶蛋白水解嵌合体(PROTAC)是一项靶向蛋白-蛋白相互作用的新技术,其通过特异性小分子抑制剂链接一个CRL E3泛素连接酶来精确降解特定促癌靶蛋白,已成为近年来利用E3泛素连接酶设计抗肿瘤靶向药物的热点。

Publication types

  • Review

MeSH terms

  • Antineoplastic Agents* / pharmacology
  • Antineoplastic Agents* / therapeutic use
  • Drug Design
  • Drug Discovery*
  • Enzyme Inhibitors / pharmacology
  • Enzyme Inhibitors / therapeutic use
  • Humans
  • Neoplasms / enzymology
  • Ubiquitin-Protein Ligases* / metabolism
  • Ubiquitination / drug effects

Substances

  • Antineoplastic Agents
  • Enzyme Inhibitors
  • Ubiquitin-Protein Ligases

Grants and funding

国家重点研发计划(2016YFA0501800)