Identification of loss-of-function HOXA2 mutations in Chinese families with dominant bilateral microtia

Gene. 2020 Oct 5:757:144945. doi: 10.1016/j.gene.2020.144945. Epub 2020 Jul 7.

Abstract

HOX genes are important regulatory genes patterning head formation, including development of the ear. Microtia is a congenital ear anomaly characterized by lacking all or part of the structures of the outer ear. To date, only four HOXA2 mutations were reported in families with autosomal-recessive or dominant microtia, with or without hearing impairment. More identified mutations are needed to confirm the correlation between genotype and phenotype. Here, we collect two Chinese families with non-syndromic bilateral microtia. Next generation sequencing identified two heterozygous nonsense HOXA2 mutations, one in each family. One mutation (c.637A > T, p.Lys213*) is newly reported, while the other one (c.703C > T,p.Gln235*) is consistent with a previous report. In mouse, Hoxa2 can bind to a long-range enhancer and regulate expression of the Hmx1 gene, which is a crucial transcription factor in eye and ear development. Using dual luciferase reporter assays, we showed that both HOXA2 mutations have impaired activation of the long-range enhancer of HMX1. In the present study, we report the first two bilateral non-syndromic microtia cases with HOXA2 mutations of Chinese origin and identify a novel mutation. Our results also provide molecular insights about how these nonsense HOXA2 mutations could affect the activation of its downstream target HMX1 by interacting with the long-range enhancer.

Keywords: Autosomal dominant inheritance; HMX1; HOXA2; Microtia.

MeSH terms

  • Cells, Cultured
  • Congenital Microtia / genetics*
  • Congenital Microtia / pathology
  • Female
  • Genes, Dominant
  • HEK293 Cells
  • Homeodomain Proteins / genetics*
  • Homeodomain Proteins / metabolism
  • Humans
  • Loss of Function Mutation*
  • Male
  • Pedigree
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism

Substances

  • HOXA2 protein, human
  • Homeodomain Proteins
  • RNA, Messenger