Rational Design of a DNA-Scaffolded High-Affinity Binder for Langerin

Angew Chem Int Ed Engl. 2020 Nov 16;59(47):21016-21022. doi: 10.1002/anie.202006880. Epub 2020 Sep 15.

Abstract

Binders of langerin could target vaccines to Langerhans cells for improved therapeutic effect. Since langerin has low affinity for monovalent glycan ligands, highly multivalent presentation has previously been key for targeting. Aiming to reduce the amount of ligand required, we rationally designed molecularly defined high-affinity binders based on the precise display of glycomimetic ligands (Glc2NTs) on DNA-PNA scaffolds. Rather than mimicking langerin's homotrimeric structure with a C3-symmetric scaffold, we developed readily accessible, easy-to-design bivalent binders. The method considers the requirements for bridging sugar binding sites and statistical rebinding as a means to both strengthen the interactions at single binding sites and amplify the avidity enhancement provided by chelation. This gave a 1150-fold net improvement over the affinity of the free ligand and provided a nanomolar binder (IC50 =300 nM) for specific internalization by langerin-expressing cells.

Keywords: DNA nanotechnology; carbohydrate recognition; lectins; multivalent interactions; peptide nucleic acids.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antigens, CD / chemistry*
  • Binding Sites
  • DNA / chemistry*
  • Humans
  • Langerhans Cells / chemistry
  • Lectins, C-Type / chemistry*
  • Ligands
  • Mannose-Binding Lectins / chemistry*
  • Models, Molecular
  • Molecular Conformation

Substances

  • Antigens, CD
  • CD207 protein, human
  • Lectins, C-Type
  • Ligands
  • Mannose-Binding Lectins
  • DNA