Nano-sized formazan analogues: Synthesis, structure elucidation, antimicrobial activity and docking study for COVID-19

Bioorg Chem. 2020 Dec:105:104354. doi: 10.1016/j.bioorg.2020.104354. Epub 2020 Oct 7.

Abstract

Three series of nanosized-formazan analogues were synthesized from the reaction of dithiazone with various types of α-haloketones (ester and acetyl substituted hydrazonoyl chlorides and phenacyl bromides) in sodium ethoxide solution. The structure and the crystal size of the new synthesized derivatives were assured based on the spectral analyses, XRD and SEM data. The antibacterial and antifungal activities were evaluated by agar diffusion technique. The results showed mild to moderate antibacterial activities and moderate to potent antifungal activities. Significant antifungal activities were observed for four derivatives 3a, 3d, 5a and 5g on the pathogenic fungal strains; Aspergillus flavus and Candida albicans with inhibition zone ranging from 16 to 20 mm. Molecular docking simulations of the synthesized compounds into leucyl-tRNA synthetase editing domain of Candida albicans suggested that most formazan analogues can fit deeply forming stable complexes in the active site. Furthermore, we utilized the docking approach to examine the potential of these compounds to inhibit SARS-CoV-2 3CLpro. The results were very promising verifying these formazan analogues as a hopeful antiviral agents.

Keywords: Antimicrobial activity; COVID-19; Nano-sized formazans; SEM; XRD diffraction.

MeSH terms

  • Anti-Infective Agents / chemical synthesis*
  • Anti-Infective Agents / metabolism
  • Anti-Infective Agents / pharmacology
  • Aspergillus flavus / drug effects
  • Binding Sites
  • COVID-19 / pathology
  • COVID-19 / virology
  • Candida albicans / drug effects
  • Catalytic Domain
  • Coronavirus 3C Proteases / chemistry
  • Coronavirus 3C Proteases / metabolism*
  • Formazans / chemistry*
  • Formazans / metabolism
  • Formazans / pharmacology
  • Fungal Proteins / chemistry
  • Fungal Proteins / metabolism
  • Gram-Negative Bacteria / drug effects
  • Gram-Positive Bacteria / drug effects
  • Humans
  • Leucine-tRNA Ligase / chemistry
  • Leucine-tRNA Ligase / metabolism
  • Molecular Docking Simulation*
  • Nanostructures / chemistry*
  • SARS-CoV-2 / isolation & purification
  • SARS-CoV-2 / metabolism*

Substances

  • Anti-Infective Agents
  • Formazans
  • Fungal Proteins
  • 3C-like proteinase, SARS-CoV-2
  • Coronavirus 3C Proteases
  • Leucine-tRNA Ligase