Mapping endothelial-cell diversity in cerebral cavernous malformations at single-cell resolution

Elife. 2020 Nov 3:9:e61413. doi: 10.7554/eLife.61413.

Abstract

Cerebral cavernous malformation (CCM) is a rare neurovascular disease that is characterized by enlarged and irregular blood vessels that often lead to cerebral hemorrhage. Loss-of-function mutations to any of three genes results in CCM lesion formation; namely, KRIT1, CCM2, and PDCD10 (CCM3). Here, we report for the first time in-depth single-cell RNA sequencing, combined with spatial transcriptomics and immunohistochemistry, to comprehensively characterize subclasses of brain endothelial cells (ECs) under both normal conditions and after deletion of Pdcd10 (Ccm3) in a mouse model of CCM. Integrated single-cell analysis identifies arterial ECs as refractory to CCM transformation. Conversely, a subset of angiogenic venous capillary ECs and respective resident endothelial progenitors appear to be at the origin of CCM lesions. These data are relevant for the understanding of the plasticity of the brain vascular system and provide novel insights into the molecular basis of CCM disease at the single cell level.

Keywords: blood brain barrier; cell biology; cerebral cavernous malformation; genetics; genomics; mouse; single cell RNA sequencing; spatial transcriptomics; vascular biology; vascular disease.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Apoptosis Regulatory Proteins / metabolism
  • Arteries / pathology
  • Brain / blood supply
  • Brain / pathology
  • Cell Differentiation
  • Disease Models, Animal
  • Endothelial Cells / cytology*
  • Gene Deletion
  • Hemangioma, Cavernous, Central Nervous System / physiopathology*
  • Immunohistochemistry
  • Mice
  • Mice, Inbred C57BL
  • Microscopy, Confocal
  • Mitosis
  • Neovascularization, Pathologic
  • Phenotype
  • RNA-Seq
  • Sequence Analysis, RNA
  • Signal Transduction / genetics
  • Single-Cell Analysis
  • Tamoxifen / pharmacology
  • Transcriptome

Substances

  • Apoptosis Regulatory Proteins
  • PDCD10 protein, mouse
  • Tamoxifen

Associated data

  • GEO/GSE155788