Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center

IUCrJ. 2020 Oct 3;7(Pt 6):1084-1091. doi: 10.1107/S2052252520012142. eCollection 2020 Nov 1.

Abstract

With the recent developments in the field of free-electron-laser-based serial femtosecond crystallography, the necessity to obtain a large number of high-quality crystals has emerged. In this work crystallization techniques were selected, tested and optimized for the lipid mesophase crystallization of the Rhodobacter sphaeroides membrane pigment-protein complex, known as the photosynthetic reaction center (RC). Novel approaches for lipid sponge phase crystallization in comparatively large volumes using Hamilton gas-tight glass syringes and plastic pipetting tips are described. An analysis of RC crystal structures obtained by lipid mesophase crystallization revealed non-native ligands that displaced the native electron-transfer cofactors (carotenoid sphero-idene and a ubi-quinone molecule) from their binding pockets. These ligands were identified and were found to be lipids that are major mesophase components. The selection of distinct co-crystallization conditions with the missing cofactors facilitated the restoration of sphero-idene in its binding site.

Keywords: Rhodobacter sphaeroides; lipid sponge phase; mesophase crystallization; monoolein; photosynthetic reaction centers; serial crystallography.

Grants and funding

This work was funded by Russian Foundation for Basic Research grants 18-02-40008 and 17-00-00207. Deutsche Forschungsgemeinschaft grant 390715994 to Christian Betzel. Bundesministerium für Bildung und Forschung grants 50WB1422 and 05K16GUA.