Type-I Interferon assessment in 45 minutes using the FilmArray® PCR platform in SARS-CoV-2 and other viral infections

Eur J Immunol. 2021 Apr;51(4):989-994. doi: 10.1002/eji.202048978. Epub 2021 Jan 27.

Abstract

Low concentrations of type-I interferon (IFN) in blood seem to be associated with more severe forms of Coronavirus disease 2019 (COVID-19). However, following the type-I interferon response (IR) in early stage disease is a major challenge. We evaluated detection of a molecular interferon signature on a FilmArray® system, which includes PCR assays for four interferon stimulated genes. We analyzed three types of patient populations: (i) children admitted to a pediatric emergency unit for fever and suspected infection, (ii) ICU-admitted patients with severe COVID-19, and (iii) healthcare workers with mild COVID-19. The results were compared to the reference tools, that is, molecular signature assessed with Nanostring® and IFN-α2 quantification by SIMOA® (Single MOlecule Array). A strong correlation was observed between the IR measured by the FilmArray®, Nanostring®, and SIMOA® platforms (r-Spearman 0.996 and 0.838, respectively). The FilmArray® panel could be used in the COVID-19 pandemic to evaluate the IR in 45-min with 2 min hand-on-time at hospitalization and to monitor the IR in future clinical trials.

Keywords: COVID-19; Clinical application; FilmArray®; In vitro diagnostic; Interferon.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • COVID-19 / blood*
  • COVID-19 / immunology
  • Child
  • Female
  • Health Personnel
  • Humans
  • Interferon Type I / blood
  • Interferon Type I / genetics
  • Interferon-alpha / blood*
  • Interferon-alpha / genetics
  • Male
  • Polymerase Chain Reaction / methods*
  • SARS-CoV-2 / immunology*

Substances

  • IFNA2 protein, human
  • Interferon Type I
  • Interferon-alpha