Functional interaction between ELL transcription elongation factor and Epe1 reveals the role of Epe1 in the regulation of transcription outside heterochromatin

Mol Microbiol. 2021 Jul;116(1):80-96. doi: 10.1111/mmi.14691. Epub 2021 Feb 16.

Abstract

Eleven-nineteen lysine-rich leukemia (ELL) is a eukaryotic RNA polymerase II transcription elongation factor. In Schizosaccharomyces pombe, it is important for survival under genotoxic stress conditions. However, the molecular basis underlying this function of ELL in S. pombe is yet to be deciphered. Here, we carried out a genetic screen to identify multicopy suppressor(s) that could restore normal growth of ell1 deletion mutant in the presence of DNA damaging agent. Sequence analysis of the identified suppressors revealed the anti-silencing protein, Epe1, as one of the suppressors of ell1 deletion associated genotoxic stress sensitivity. Our results further demonstrate that the overexpression of Epe1 could suppress all other phenotypes associated with the absence of Ell1. Moreover, transcriptional defect of ell1Δ strain could also be alleviated by the overexpression of Epe1. Epe1 also showed a physical interaction with Ell1. Interestingly, we also observed that the region of Epe1 encompassing 403-948 amino acids was indispensable for all the above functions. Furthermore, our results show that the overexpression of Epe1 causes increased H3K9 acetylation and RNA polymerase II recruitment. Taken together, our results show a functional interaction between Epe1 and Ell1, and this function is independent of the well-known JmjC and N-terminal transcriptional activation domains of Epe1 in S. pombe.

Keywords: Schizosaccharomyces pombe; ELL; Epe1; RNA polymerase II; chromatin remodeling; histone acetylation; transcription elongation factor.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylation
  • Amino Acid Sequence
  • DNA Damage / genetics*
  • Gene Deletion
  • Gene Expression Regulation, Fungal / genetics
  • Gene Silencing
  • Heterochromatin / genetics
  • Histones / metabolism
  • Jumonji Domain-Containing Histone Demethylases / metabolism
  • Nuclear Proteins / genetics*
  • Nuclear Proteins / metabolism
  • Plasmids / genetics
  • RNA Polymerase II / metabolism
  • Schizosaccharomyces / genetics*
  • Schizosaccharomyces pombe Proteins / genetics*
  • Schizosaccharomyces pombe Proteins / metabolism
  • Transcription, Genetic / genetics
  • Transcriptional Activation / genetics
  • Transcriptional Elongation Factors / genetics*
  • Transcriptional Elongation Factors / metabolism

Substances

  • Heterochromatin
  • Histones
  • Nuclear Proteins
  • Schizosaccharomyces pombe Proteins
  • Transcriptional Elongation Factors
  • ell1 protein, S pombe
  • epe1 protein, S pombe
  • Jumonji Domain-Containing Histone Demethylases
  • RNA Polymerase II