Network model-based screen for FDA-approved drugs affecting cardiac fibrosis

CPT Pharmacometrics Syst Pharmacol. 2021 Apr;10(4):377-388. doi: 10.1002/psp4.12599. Epub 2021 Feb 27.

Abstract

Cardiac fibrosis is a significant component of pathological heart remodeling, yet it is not directly targeted by existing drugs. Systems pharmacology approaches have the potential to provide mechanistic frameworks with which to predict and understand how drugs modulate biological systems. Here, we combine network modeling of the fibroblast signaling network with 36 unique drug-target interactions from DrugBank to predict drugs that modulate fibroblast phenotype and fibrosis. Galunisertib was predicted to decrease collagen and α-SMA expression, which we validated in human cardiac fibroblasts. In vivo fibrosis data from the literature validated predictions for 10 drugs. Further, the model was used to identify network mechanisms by which these drugs work. Arsenic trioxide was predicted to induce fibrosis by AP1-driven TGFβ expression and MMP2-driven TGFβ activation. Entresto (valsartan/sacubitril) was predicted to suppress fibrosis by valsartan suppression of ERK signaling and sacubitril enhancement of PKG activity, both of which decreased Smad3 activity. Overall, this study provides a framework for integrating drug-target mechanisms with logic-based network models, which can drive further studies both in cardiac fibrosis and other conditions.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Aminobutyrates / pharmacology*
  • Angiotensin Receptor Antagonists / pharmacology*
  • Animals
  • Arsenic Trioxide / adverse effects
  • Biphenyl Compounds / pharmacology*
  • Computer Simulation
  • Drug Combinations
  • Fibroblasts / drug effects
  • Fibroblasts / metabolism
  • Fibrosis / chemically induced
  • Fibrosis / diagnosis
  • Heart Diseases / pathology
  • Humans
  • MAP Kinase Signaling System / drug effects
  • MAP Kinase Signaling System / genetics
  • Matrix Metalloproteinase 2 / pharmacology
  • Models, Animal
  • Network Pharmacology
  • Pyrazoles / pharmacology*
  • Quaternary Ammonium Compounds / pharmacology
  • Quinolines / pharmacology*
  • Rats
  • Receptors, Transforming Growth Factor beta / antagonists & inhibitors*
  • Receptors, Transforming Growth Factor beta / metabolism
  • Signal Transduction / drug effects
  • Smad3 Protein / drug effects
  • Smad3 Protein / metabolism
  • Thioctic Acid / analogs & derivatives
  • Thioctic Acid / pharmacology
  • Valsartan / pharmacology*

Substances

  • AP1 compound
  • Aminobutyrates
  • Angiotensin Receptor Antagonists
  • Biphenyl Compounds
  • Drug Combinations
  • Pyrazoles
  • Quaternary Ammonium Compounds
  • Quinolines
  • Receptors, Transforming Growth Factor beta
  • SMAD3 protein, human
  • Smad3 Protein
  • LY-2157299
  • Thioctic Acid
  • Valsartan
  • Matrix Metalloproteinase 2
  • Arsenic Trioxide
  • sacubitril and valsartan sodium hydrate drug combination