Real-time PCR assay as a simple and efficient tool for viral stability study

Bioanalysis. 2021 Mar;13(5):387-394. doi: 10.4155/bio-2021-0002. Epub 2021 Mar 4.

Abstract

Aim: For oncolytic virus trials, regulatory agencies often require pharmaceutical industry to evaluate risks of released viruses from patients to environment. This study was to establish a real-time PCR method to assess viral shedding and viral stability in human urine. Results/methodology: Herein, we describe an incubation of viral drug product in human urine and use of real-time PCR as a simple, efficient and high throughput assay to assess the level and stability of a nonenveloped and single stranded RNA virus. The viral stability issue is critical to the collection, transport, storage and testing of clinical samples. Discussion/conclusion: In summary, this simple method provides useful viral stability information at various temperatures and detergents. A similar approach may apply to other RNA viruses (including SARS-CoV-2).

Keywords: RNA degradation; RT-PCR; human serum; human urine; oncolytic virus; reverse transcription and real-time PCR; viral infectivity; viral shedding; viral stability.

MeSH terms

  • COVID-19 / diagnosis
  • COVID-19 / virology
  • Detergents / chemistry
  • Humans
  • RNA Stability
  • RNA, Viral / blood
  • RNA, Viral / metabolism*
  • RNA, Viral / urine
  • Real-Time Polymerase Chain Reaction*
  • SARS-CoV-2 / genetics
  • SARS-CoV-2 / isolation & purification
  • Temperature
  • Virus Diseases / diagnosis*
  • Virus Diseases / virology

Substances

  • Detergents
  • RNA, Viral