Igh Locus Polymorphism May Dictate Topological Chromatin Conformation and V Gene Usage in the Ig Repertoire

Front Immunol. 2021 May 18:12:682589. doi: 10.3389/fimmu.2021.682589. eCollection 2021.

Abstract

Vast repertoires of unique antigen receptors are created in developing B and T lymphocytes. The antigen receptor loci contain many variable (V), diversity (D) and joining (J) gene segments that are arrayed across very large genomic expanses and are joined to form variable-region exons of expressed immunoglobulins and T cell receptors. This process creates the potential for an organism to respond to large numbers of different pathogens. Here, we consider the possibility that genetic polymorphisms with alterations in a vast array of regulatory elements in the immunoglobulin heavy chain (IgH) locus lead to changes in locus topology and impact immune-repertoire formation.

Keywords: B cell; Chromatin; VDJ recombination; VDJ repertoire; immunoglobulin.

Publication types

  • Research Support, N.I.H., Extramural
  • Review

MeSH terms

  • Animals
  • Chromatin / genetics*
  • Enhancer Elements, Genetic
  • Gene Rearrangement, B-Lymphocyte
  • Gene Rearrangement, T-Lymphocyte
  • Genetic Loci
  • Humans
  • Immunoglobulin Heavy Chains / genetics*
  • Polymorphism, Genetic*
  • Promoter Regions, Genetic
  • Somatic Hypermutation, Immunoglobulin*
  • Transcription, Genetic
  • V(D)J Recombination*

Substances

  • Chromatin
  • Immunoglobulin Heavy Chains