Large-scale prospective genome-wide association study of oxaliplatin in stage II/III colon cancer and neuropathy

Ann Oncol. 2021 Nov;32(11):1434-1441. doi: 10.1016/j.annonc.2021.08.1745. Epub 2021 Aug 12.

Abstract

Background: The severity of oxaliplatin (L-OHP)-induced peripheral sensory neuropathy (PSN) exhibits substantial interpatient variability, and some patients suffer from long-term, persisting PSN. To identify single-nucleotide polymorphisms (SNPs) predicting L-OHP-induced PSN using a genome-wide association study (GWAS) approach.

Patients and methods: A large prospective GWAS including 1379 patients with stage II/III colon cancer who received L-OHP-based adjuvant chemotherapy (mFOLFOX6/CAPOX) under the phase II (JOIN/JFMC41) or the phase III (ACHIVE/JFMC47) trial. Firstly, GWAS comparison of worst grade PSN (grade 0/1 versus 2/3) was carried out. Next, to minimize the impact of ambiguity in PSN grading, extreme PSN phenotypes were selected and analyzed by GWAS. SNPs that could predict time to recovery from PSN were also evaluated. In addition, SNPs associated with L-OHP-induced allergic reactions (AR) and time to disease recurrence were explored.

Results: No SNPs exceeded the genome-wide significance (P < 5.0 × 10-8) in either GWAS comparison of worst grade PSN, extreme PSN phenotypes, or time to recovery from PSN. An association study focusing on AR or time to disease recurrence also failed to reveal any significant SNPs.

Conclusion: Our results highlight the challenges of utilizing SNPs for predicting susceptibility to L-OHP-induced PSN in daily clinical practice.

Keywords: colon cancer; genome-wide association study; oxaliplatin; peripheral sensory neuropathy; pharmacogenomics.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antineoplastic Combined Chemotherapy Protocols
  • Chemotherapy, Adjuvant
  • Clinical Trials, Phase II as Topic
  • Clinical Trials, Phase III as Topic
  • Colonic Neoplasms* / drug therapy
  • Colonic Neoplasms* / genetics
  • Fluorouracil / therapeutic use
  • Genome-Wide Association Study*
  • Humans
  • Neoplasm Recurrence, Local
  • Oxaliplatin / adverse effects
  • Prospective Studies

Substances

  • Oxaliplatin
  • Fluorouracil