Evaluation of pharmacogenomics and hepatic nuclear imaging-related covariates by population pharmacokinetic models of irinotecan and its metabolites

Eur J Clin Pharmacol. 2022 Jan;78(1):53-64. doi: 10.1007/s00228-021-03206-w. Epub 2021 Sep 4.

Abstract

Background: Body surface area (BSA)-based dosing of irinotecan (IR) does not account for its pharmacokinetic (PK) and pharmacodynamic (PD) variabilities. Functional hepatic nuclear imaging (HNI) and excretory/metabolic/PD pharmacogenomics have shown correlations with IR disposition and toxicity/efficacy. This study reports the development of a nonlinear mixed-effect population model to identify pharmacogenomic and HNI-related covariates that impact on IR disposition to support dosage optimization.

Methods: Patients had advanced colorectal cancer treated with IR combination therapy. Baseline blood was analysed by Affymetrix DMET™ Plus Array and, for PD, single nucleotide polymorphisms (SNPs) by Sanger sequencing. For HNI, patients underwent 99mTc-IDA hepatic imaging, and data was analysed for hepatic extraction/excretion parameters. Blood was taken for IR and metabolite (SN38, SN38G) analysis on day 1 cycle 1. Population modelling utilised NONMEM version 7.2.0, with structural PK models developed for each moiety. Covariates include patient demographics, HNI parameters and pharmacogenomic variants.

Results: Analysis included (i) PK data: 32 patients; (ii) pharmacogenomic data: 31 patients: 750 DMET and 22 PD variants; and (iii) HNI data: 32 patients. On initial analysis, overall five SNPs were identified as significant covariates for CLSN38. Only UGT1A3_c.31 T > C and ABCB1_c.3435C > T were included in the final model, whereby CLSN38 reduced from 76.8 to 55.1%.

Conclusion: The identified UGT1A3_c.31 T > C and ABCB1_c.3435C > T variants, from wild type to homozygous, were included in the final model for SN38 clearance.

Keywords: DMET; Hepatic functional imaging; Irinotecan; Pharmacodynamics; Pharmacokinetics; Population model.

MeSH terms

  • ATP Binding Cassette Transporter, Subfamily B / genetics
  • Antineoplastic Combined Chemotherapy Protocols / therapeutic use
  • Australia
  • Colorectal Neoplasms / drug therapy*
  • Colorectal Neoplasms / pathology
  • Genotype
  • Glucuronosyltransferase / genetics*
  • Humans
  • Irinotecan / pharmacokinetics*
  • Irinotecan / therapeutic use
  • Liver / diagnostic imaging
  • Liver / metabolism*
  • Models, Biological
  • Neoplasm Metastasis
  • Pharmacogenetics
  • Pharmacogenomic Variants
  • Polymorphism, Single Nucleotide
  • Prospective Studies
  • Topoisomerase I Inhibitors / pharmacokinetics*
  • Topoisomerase I Inhibitors / therapeutic use

Substances

  • ABCB1 protein, human
  • ATP Binding Cassette Transporter, Subfamily B
  • Topoisomerase I Inhibitors
  • Irinotecan
  • UDP-glucuronosyltransferase, UGT1A3
  • Glucuronosyltransferase