A complex KMT2A::AFF3 fusion resulting from a three-way chromosomal rearrangement in pediatric B lymphoblastic leukemia

Cancer Genet. 2022 Apr:262-263:43-46. doi: 10.1016/j.cancergen.2021.12.005. Epub 2021 Dec 23.

Abstract

The KMT2A::AFF3 fusion, t(2;11)(q11.2;q23.2), is a very rare fusion occurring in pediatric B-cell acute lymphoblastic leukemia (B-ALL). Our patient is a 2-year-old male who presented with three weeks of intermittent fever. Bone marrow biopsy showed 82% blasts and cytogenetic analysis demonstrated a complex 3-way chromosomal rearrangement involving KMT2A and an unknown fusion partner. Molecular testing identified the fusion partner as AFF3, a FLT3-TKD non-D835 mutation, and an NF1 mutation. This case demonstrates a highly complex three-way variant translocation resulting in the rare KMT2A::AFF3 fusion with only a few cases previously described in the literature.

Publication types

  • Case Reports

MeSH terms

  • Child, Preschool
  • Chromosome Aberrations
  • Gene Fusion
  • Humans
  • Lymphoma, Non-Hodgkin* / genetics
  • Male
  • Myeloid-Lymphoid Leukemia Protein / genetics
  • Nuclear Proteins / genetics
  • Oncogene Proteins, Fusion / genetics
  • Precursor Cell Lymphoblastic Leukemia-Lymphoma* / genetics
  • Translocation, Genetic

Substances

  • AFF3 protein, human
  • Nuclear Proteins
  • Oncogene Proteins, Fusion
  • Myeloid-Lymphoid Leukemia Protein