Structure of the 5' untranslated region in SARS-CoV-2 genome and its specific recognition by innate immune system via the human oligoadenylate synthase 1

Chem Commun (Camb). 2022 Feb 10;58(13):2176-2179. doi: 10.1039/d1cc07006a.

Abstract

2'-5'-Oligoadenylate synthetase 1 (OAS1) is one of the key enzymes driving the innate immune system response to SARS-CoV-2 infection whose activity has been related to COVID-19 severity. OAS1 is a sensor of endogenous RNA that triggers the 2'-5'-oligoadenylate/RNase L pathway. Upon SARS-CoV-2 infection, OAS1 is responsible for the recognition of viral RNA and has been shown to possess a particularly high sensitivity for the 5'-untranslated (5'-UTR) RNA region, which is organized in a double-strand stem loop motif (SL1). Here we report the structure of the SL1/OAS1 complex also rationalizing the high affinity for OAS1.

MeSH terms

  • 2',5'-Oligoadenylate Synthetase / metabolism*
  • 5' Untranslated Regions
  • Base Sequence
  • Binding Sites
  • COVID-19 / pathology
  • COVID-19 / virology
  • Humans
  • Immunity, Innate*
  • Molecular Dynamics Simulation
  • Nucleic Acid Conformation
  • RNA, Viral / chemistry
  • RNA, Viral / genetics
  • RNA, Viral / metabolism*
  • SARS-CoV-2 / genetics*
  • SARS-CoV-2 / isolation & purification

Substances

  • 5' Untranslated Regions
  • RNA, Viral
  • OAS1 protein, human
  • 2',5'-Oligoadenylate Synthetase