Developing an immune signature for triple-negative breast cancer to predict prognosis and immune checkpoint inhibitor response

Future Oncol. 2022 Mar;18(9):1055-1066. doi: 10.2217/fon-2021-0600. Epub 2022 Feb 2.

Abstract

Aim: We aimed to develop a new signature based on immune-related genes to predict prognosis and response to immune checkpoint inhibitors in patients with triple-negative breast cancer (TNBC). Materials & methods: Single-sample gene set enrichment was used to develop an immune-based prognostic signature (IPRS) for TNBC patients. We conducted multivariate Cox analysis to evaluate the prognosis value of the IPRS. Result: An IPRS based on 66 prognostic genes was developed. Multivariate Cox analysis indicated that the IPRS was an independent factor for prognosis. PD-1, PD-L1, PD-L2 and CTLA4 gene expression was higher in the low-risk group, suggesting IPRS could predict the response to immune checkpoint inhibitors. Conclusion: The IPRS might be a reliable signature to predict TNBC patients' prognosis and response to immune checkpoint inhibitors, but needs prospective validation.

Keywords: gene set enrichment analysis; immune checkpoint inhibitors; immune infiltration cells; overall survival; pathway enrichment; prognosis; progression-free survival; public dataset; signature; triple-negative breast cancer.

Publication types

  • Evaluation Study

MeSH terms

  • Biomarkers, Tumor
  • Female
  • Gene Expression Regulation, Neoplastic*
  • Humans
  • Immune Checkpoint Inhibitors / therapeutic use*
  • Middle Aged
  • Prognosis*
  • Proportional Hazards Models
  • Triple Negative Breast Neoplasms / drug therapy*
  • Triple Negative Breast Neoplasms / genetics
  • Triple Negative Breast Neoplasms / mortality

Substances

  • Biomarkers, Tumor
  • Immune Checkpoint Inhibitors