Backbone and ILV side-chain NMR resonance assignments of the catalytic domain of human deubiquitinating enzyme USP7

Biomol NMR Assign. 2022 Oct;16(2):197-203. doi: 10.1007/s12104-022-10079-2. Epub 2022 May 10.

Abstract

Ubiquitin specific protease 7 (USP7) is a deubiquitinating enzyme, which removes ubiquitin tag from numerous protein substrates involved in diverse cellular processes such as cell cycle regulation, apoptosis and DNA damage response. USP7 affects stability, interaction network and cellular localization of its cellular and viral substrates by controlling their ubiquitination status. The large 41 kDa catalytic domain of USP7 harbors the active site of the enzyme. Here we present a nearly complete (93%) NMR resonance assignment of isoleucine, leucine and valine (ILV) side-chains of the USP7 catalytic domain along with a refined nearly complete (93%) assignment of its backbone resonances. The reported ILV methyl group assignment will facilitate further NMR investigations of structure, interactions and conformational dynamics of the USP7 enzyme.

Keywords: Deubiquitinating enzyme; Deubiquitination; NMR resonance assignment; Protease; Selective labeling; USP7; Ubiquitin specific protease 7.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Catalytic Domain
  • Humans
  • Isoleucine*
  • Leucine
  • Nuclear Magnetic Resonance, Biomolecular
  • Ubiquitin Thiolesterase / chemistry
  • Ubiquitin-Specific Peptidase 7 / metabolism
  • Ubiquitins
  • Valine*

Substances

  • Ubiquitins
  • Isoleucine
  • USP7 protein, human
  • Ubiquitin Thiolesterase
  • Ubiquitin-Specific Peptidase 7
  • Leucine
  • Valine