Structure, receptor recognition, and antigenicity of the human coronavirus CCoV-HuPn-2018 spike glycoprotein

Cell. 2022 Jun 23;185(13):2279-2291.e17. doi: 10.1016/j.cell.2022.05.019. Epub 2022 May 27.

Abstract

The isolation of CCoV-HuPn-2018 from a child respiratory swab indicates that more coronaviruses are spilling over to humans than previously appreciated. We determined the structures of the CCoV-HuPn-2018 spike glycoprotein trimer in two distinct conformational states and showed that its domain 0 recognizes sialosides. We identified that the CCoV-HuPn-2018 spike binds canine, feline, and porcine aminopeptidase N (APN) orthologs, which serve as entry receptors, and determined the structure of the receptor-binding B domain in complex with canine APN. The introduction of an oligosaccharide at position N739 of human APN renders cells susceptible to CCoV-HuPn-2018 spike-mediated entry, suggesting that single-nucleotide polymorphisms might account for viral detection in some individuals. Human polyclonal plasma antibodies elicited by HCoV-229E infection and a porcine coronavirus monoclonal antibody inhibit CCoV-HuPn-2018 spike-mediated entry, underscoring the cross-neutralizing activity among ɑ-coronaviruses. These data pave the way for vaccine and therapeutic development targeting this zoonotic pathogen representing the eighth human-infecting coronavirus.

Keywords: CCoV-HuPn-2018; HCoV-229E; aminopeptidase; cryo-EM; sialosides; zoonotic viruses; ɑ-coronaviruses.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • CD13 Antigens / chemistry
  • CD13 Antigens / metabolism
  • Cats
  • Cell Line
  • Coronavirus 229E, Human* / metabolism
  • Coronavirus Infections*
  • Coronavirus* / metabolism
  • Dogs
  • Humans
  • Receptors, Virus / metabolism
  • Spike Glycoprotein, Coronavirus / metabolism
  • Swine

Substances

  • Receptors, Virus
  • Spike Glycoprotein, Coronavirus
  • CD13 Antigens