A proposed unified interphase nucleus chromosome structure: Preliminary preponderance of evidence

Proc Natl Acad Sci U S A. 2022 Jun 28;119(26):e2119101119. doi: 10.1073/pnas.2119101119. Epub 2022 Jun 24.

Abstract

Cryoelectron tomography of the cell nucleus using scanning transmission electron microscopy and deconvolution processing technology has highlighted a large-scale, 100- to 300-nm interphase chromosome structure, which is present throughout the nucleus. This study further documents and analyzes these chromosome structures. The paper is divided into four parts: 1) evidence (preliminary) for a unified interphase chromosome structure; 2) a proposed unified interphase chromosome architecture; 3) organization as chromosome territories (e.g., fitting the 46 human chromosomes into a 10-μm-diameter nucleus); and 4) structure unification into a polytene chromosome architecture and lampbrush chromosomes. Finally, the paper concludes with a living light microscopy cell study showing that the G1 nucleus contains very similar structures throughout. The main finding is that this chromosome structure appears to coil the 11-nm nucleosome fiber into a defined hollow structure, analogous to a Slinky helical spring [https://en.wikipedia.org/wiki/Slinky; motif used in Bowerman et al., eLife 10, e65587 (2021)]. This Slinky architecture can be used to build chromosome territories, extended to the polytene chromosome structure, as well as to the structure of lampbrush chromosomes.

Keywords: chromosome structure; cryo-EM tomography; deconvolution; electron microscopy.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, N.I.H., Extramural

MeSH terms

  • Cell Nucleus* / genetics
  • Chromatin / genetics
  • Chromosomes, Human* / chemistry
  • Humans
  • Interphase* / genetics
  • Nucleosomes / chemistry

Substances

  • Chromatin
  • Nucleosomes