Silencing FOXP2 reverses vemurafenib resistance in BRAFV600E mutant papillary thyroid cancer and melanoma cells

Endocrine. 2023 Jan;79(1):86-97. doi: 10.1007/s12020-022-03180-y. Epub 2022 Nov 4.

Abstract

Background: Vemurafenib (VEM) is a commonly used inhibitor of papillary thyroid cancer (PTC) and melanoma with the BRAFV600E mutation; however, acquired resistance is unavoidable. The present study aimed to identify a potential target to reverse resistance.

Materials and methods: A VEM-resistant PTC cell line (B-CPAP/VR) was established by gradually increasing the drug concentration, and a VEM-resistant BRAFV600E melanoma cell line (A375/VR) was also established. RNA sequencing and bioinformatics analyses were conducted to identify dysregulated genes and construct a transcription factor (TF) network. The role of a potential TF, forkhead box P2 (FOXP2), verified by qRT-PCR, was selected for further confirmation.

Results: The two resistant cell lines were tolerant of VEM and displayed higher migration and colony formation abilities (p < 0.05). RNA sequencing identified 9177 dysregulated genes in the resistant cell lines, and a TF network consisting of 13 TFs and 44 target genes was constructed. Alterations in FOXP2 expression were determined to be consistent between the two VEM-resistant cell lines. Finally, silencing FOXP2 resulted in an increase in drug sensitivity and significant suppression of the migration and colony formation abilities of the two resistant cell lines (p < 0.05).

Conclusions: The present study successfully established two VEM-resistant cell lines and identified a potential target for VEM-resistant PTC or melanoma.

Keywords: BRAF mutant; FOXP2; Melanoma; Papillary thyroid cancer; VEM resistance.

MeSH terms

  • Cell Line, Tumor
  • Drug Resistance, Neoplasm / genetics
  • Forkhead Transcription Factors / genetics
  • Humans
  • Melanoma* / drug therapy
  • Melanoma* / genetics
  • Mutation
  • Proto-Oncogene Proteins B-raf / genetics
  • Proto-Oncogene Proteins B-raf / metabolism
  • Sulfonamides / pharmacology
  • Thyroid Cancer, Papillary / drug therapy
  • Thyroid Cancer, Papillary / genetics
  • Thyroid Neoplasms* / drug therapy
  • Thyroid Neoplasms* / genetics
  • Vemurafenib / pharmacology

Substances

  • Vemurafenib
  • Proto-Oncogene Proteins B-raf
  • Sulfonamides
  • FOXP2 protein, human
  • Forkhead Transcription Factors
  • BRAF protein, human