Selective incorporation of 5-hydroxytryptophan blocks long range electron transfer in oxalate decarboxylase

Protein Sci. 2023 Jan;32(1):e4537. doi: 10.1002/pro.4537.

Abstract

Oxalate decarboxylase from Bacillus subtilis is a binuclear Mn-dependent acid stress response enzyme that converts the mono-anion of oxalic acid into formate and carbon dioxide in a redox neutral unimolecular disproportionation reaction. A π-stacked tryptophan dimer, W96 and W274, at the interface between two monomer subunits facilitates long-range electron transfer between the two Mn ions and plays an important role in the catalytic mechanism. Substitution of W96 with the unnatural amino acid 5-hydroxytryptophan leads to a persistent EPR signal which can be traced back to the neutral radical of 5-hydroxytryptophan with its hydroxyl proton removed. 5-Hydroxytryptophan acts as a hole sink preventing the formation of Mn(III) at the N-terminal active site and strongly suppresses enzymatic activity. The lower boundary of the standard reduction potential for the active site Mn(II)/Mn(III) couple can therefore be estimated as 740 mV against the normal hydrogen electrode at pH 4, the pH of maximum catalytic efficiency. Our results support the catalytic importance of long-range electron transfer in oxalate decarboxylase while at the same time highlighting the utility of unnatural amino acid incorporation and specifically the use of 5-hydroxytryptophan as an energetic sink for hole hopping to probe electron transfer in redox proteins.

Keywords: 5-hydroxytryptophan; density functional theory; electron paramagnetic resonance; genetic code expansion; long range electron transfer; oxalate decarboxylase.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • 5-Hydroxytryptophan* / metabolism
  • Electron Spin Resonance Spectroscopy
  • Electrons*
  • Manganese / chemistry
  • Oxalic Acid
  • Oxidation-Reduction

Substances

  • oxalate decarboxylase
  • 5-Hydroxytryptophan
  • Manganese
  • Oxalic Acid