Development of Potent and Highly Selective Epoxyketone-Based Plasmodium Proteasome Inhibitors

Chemistry. 2023 Apr 6;29(20):e202203958. doi: 10.1002/chem.202203958. Epub 2023 Mar 6.

Abstract

Here, we present remarkable epoxyketone-based proteasome inhibitors with low nanomolar in vitro potency for blood-stage Plasmodium falciparum and low cytotoxicity for human cells. Our best compound has more than 2,000-fold greater selectivity for erythrocytic-stage P. falciparum over HepG2 and H460 cells, which is largely driven by the accommodation of the parasite proteasome for a D-amino acid in the P3 position and the preference for a difluorobenzyl group in the P1 position. We isolated the proteasome from P. falciparum cell extracts and determined that the best compound is 171-fold more potent at inhibiting the β5 subunit of P. falciparum proteasome when compared to the same subunit of the human constitutive proteasome. These compounds also significantly reduce parasitemia in a P. berghei mouse infection model and prolong survival of animals by an average of 6 days. The current epoxyketone inhibitors are ideal starting compounds for orally bioavailable anti-malarial drugs.

Keywords: epoxyketone; inhibition; malaria; plasmodium; proteasome.

MeSH terms

  • Animals
  • Antimalarials* / pharmacology
  • Humans
  • Mice
  • Plasmodium falciparum
  • Plasmodium*
  • Proteasome Endopeptidase Complex / chemistry
  • Proteasome Inhibitors / chemistry

Substances

  • Proteasome Inhibitors
  • Proteasome Endopeptidase Complex
  • Antimalarials