SLiM-binding pockets: an attractive target for broad-spectrum antivirals

Trends Biochem Sci. 2023 May;48(5):420-427. doi: 10.1016/j.tibs.2022.12.004. Epub 2023 Jan 7.

Abstract

Short linear motif (SLiM)-mediated interactions offer a unique strategy for viral intervention due to their compact interfaces, ease of convergent evolution, and key functional roles. Consequently, many viruses extensively mimic host SLiMs to hijack or deregulate cellular pathways and the same motif-binding pocket is often targeted by numerous unrelated viruses. A toolkit of therapeutics targeting commonly mimicked SLiMs could provide prophylactic and therapeutic broad-spectrum antivirals and vastly improve our ability to treat ongoing and future viral outbreaks. In this opinion article, we discuss the therapeutic relevance of SLiMs, advocating their suitability as targets for broad-spectrum antiviral inhibitors.

Keywords: inhibitors; protein–protein interactions; short linear motifs; viral outbreak preparedness; viruses.

Publication types

  • Review

MeSH terms

  • Amino Acid Motifs*
  • Antiviral Agents* / pharmacology

Substances

  • Antiviral Agents