Molecular determinants of protein evolvability

Trends Biochem Sci. 2023 Sep;48(9):751-760. doi: 10.1016/j.tibs.2023.05.009. Epub 2023 Jun 15.

Abstract

The plethora of biological functions that sustain life is rooted in the remarkable evolvability of proteins. An emerging view highlights the importance of a protein's initial state in dictating evolutionary success. A deeper comprehension of the mechanisms that govern the evolvability of these initial states can provide invaluable insights into protein evolution. In this review, we describe several molecular determinants of protein evolvability, unveiled by experimental evolution and ancestral sequence reconstruction studies. We further discuss how genetic variation and epistasis can promote or constrain functional innovation and suggest putative underlying mechanisms. By establishing a clear framework for these determinants, we provide potential indicators enabling the forecast of suitable evolutionary starting points and delineate molecular mechanisms in need of deeper exploration.

Keywords: enzyme promiscuity; evolvability; functional heterogeneity; molecular ensembles; protein evolution; stability.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biological Evolution
  • Evolution, Molecular*
  • Proteins* / genetics

Substances

  • Proteins