A dual role for the chromatin reader ORCA/LRWD1 in targeting the origin recognition complex to chromatin

EMBO J. 2023 Sep 18;42(18):e114654. doi: 10.15252/embj.2023114654. Epub 2023 Aug 8.

Abstract

Eukaryotic cells use chromatin marks to regulate the initiation of DNA replication. The origin recognition complex (ORC)-associated protein ORCA plays a critical role in heterochromatin replication in mammalian cells by recruiting the initiator ORC, but the underlying mechanisms remain unclear. Here, we report crystal and cryo-electron microscopy structures of ORCA in complex with ORC's Orc2 subunit and nucleosomes, establishing that ORCA orchestrates ternary complex assembly by simultaneously recognizing a highly conserved peptide sequence in Orc2, nucleosomal DNA, and repressive histone trimethylation marks through an aromatic cage. Unexpectedly, binding of ORCA to nucleosomes prevents chromatin array compaction in a manner that relies on H4K20 trimethylation, a histone modification critical for heterochromatin replication. We further show that ORCA is necessary and sufficient to specifically recruit ORC into chromatin condensates marked by H4K20 trimethylation, providing a paradigm for studying replication initiation in specific chromatin contexts. Collectively, our findings support a model in which ORCA not only serves as a platform for ORC recruitment to nucleosomes bearing specific histone marks but also helps establish a local chromatin environment conducive to subsequent MCM2-7 loading.

Keywords: Chromatin; DNA replication initiation; MCM2-7 loading; Origin licensing; Origin recognition complex.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Chromatin* / genetics
  • Cryoelectron Microscopy
  • DNA Replication
  • Heterochromatin* / genetics
  • Mammals / genetics
  • Nucleosomes / genetics
  • Origin Recognition Complex / genetics
  • Origin Recognition Complex / metabolism
  • Replication Origin
  • Transcription Factors / genetics

Substances

  • Chromatin
  • Heterochromatin
  • Origin Recognition Complex
  • Nucleosomes
  • Transcription Factors

Associated data

  • PDB/8SIU
  • PDB/8SIY