CRISPR/Cas as a Genome-Editing Technique in Fruit Tree Breeding

Int J Mol Sci. 2023 Nov 23;24(23):16656. doi: 10.3390/ijms242316656.

Abstract

CRISPR (short for "Clustered Regularly Interspaced Short Palindromic Repeats") is a technology that research scientists use to selectively modify the DNA of living organisms. CRISPR was adapted for use in the laboratory from the naturally occurring genome-editing systems found in bacteria. In this work, we reviewed the methods used to introduce CRISPR/Cas-mediated genome editing into fruit species, as well as the impacts of the application of this technology to activate and knock out target genes in different fruit tree species, including on tree development, yield, fruit quality, and tolerance to biotic and abiotic stresses. The application of this gene-editing technology could allow the development of new generations of fruit crops with improved traits by targeting different genetic segments or even could facilitate the introduction of traits into elite cultivars without changing other traits. However, currently, the scarcity of efficient regeneration and transformation protocols in some species, the fact that many of those procedures are genotype-dependent, and the convenience of segregating the transgenic parts of the CRISPR system represent the main handicaps limiting the potential of genetic editing techniques for fruit trees. Finally, the latest news on the legislation and regulations about the use of plants modified using CRISPR/Cas systems has been also discussed.

Keywords: breeding; genomic; molecular biology; plants; transgenic transformation.

Publication types

  • Review

MeSH terms

  • CRISPR-Cas Systems* / genetics
  • Crops, Agricultural / genetics
  • Fruit / genetics
  • Gene Editing* / methods
  • Genome, Plant
  • Plant Breeding / methods
  • Trees / genetics

Grants and funding

This study is part of the PID2021-123764OB-I00 project and AGROALNEXT Program that has been financed by MCIN with NextGenerationEU funds (PRTR-C17.I1) and by the Séneca Foundation with funds from the Autonomous Community of the Region of Murcia (CARM). This study has been also partially supported by the project PID2022-137499OB-I00 financed by MCIN/AEI/10.13039/501100011033/FEDER, UE. C.P.C. acknowledges the “Ministerio Español de Ciencia, Innovación y Universidades” for its support through a “Formación de Profesorado Universitario” grant (FPU19/03767). G.O.H. acknowledges the Fundación Séneca (Región de Murcia, Spain) for its support through the “21788/FPI/22” fellowship. M.M.V. acknowledges the “Consejo Superior de Investigaciones Científicas” for its support through the JAEINT_22_00399 fellowship. The authors also thank the anonymous referees for their critical comments on this manuscript.