The making and breaking of tRNAs by ribonucleases

Trends Genet. 2024 Jun;40(6):511-525. doi: 10.1016/j.tig.2024.03.007. Epub 2024 Apr 18.

Abstract

Ribonucleases (RNases) play important roles in supporting canonical and non-canonical roles of tRNAs by catalyzing the cleavage of the tRNA phosphodiester backbone. Here, we highlight how recent advances in cryo-electron microscopy (cryo-EM), protein structure prediction, reconstitution experiments, tRNA sequencing, and other studies have revealed new insight into the nucleases that process tRNA. This represents a very diverse group of nucleases that utilize distinct mechanisms to recognize and cleave tRNA during different stages of a tRNA's life cycle including biogenesis, fragmentation, surveillance, and decay. In this review, we provide a synthesis of the structure, mechanism, regulation, and modes of tRNA recognition by tRNA nucleases, along with open questions for future investigation.

Keywords: ribonuclease; tRNA; tRNA decay; tRNA fragments; tRNA processing.

Publication types

  • Review

MeSH terms

  • Cryoelectron Microscopy*
  • Humans
  • Nucleic Acid Conformation
  • RNA, Transfer* / chemistry
  • RNA, Transfer* / genetics
  • Ribonucleases* / chemistry
  • Ribonucleases* / genetics
  • Ribonucleases* / metabolism

Substances

  • RNA, Transfer
  • Ribonucleases