Dissemination of the Flavivirus Subgenomic Replicon Genome and Viral Proteins by Extracellular Vesicles

Viruses. 2024 Mar 28;16(4):524. doi: 10.3390/v16040524.

Abstract

Extracellular vesicles (EVs) such as exosomes have been shown to play physiological roles in cell-to-cell communication by delivering various proteins and nucleic acids. In addition, several studies revealed that the EVs derived from the cells that are infected with certain viruses could transfer the full-length viral genomes, resulting in EVs-mediated virus propagation. However, the possibility cannot be excluded that the prepared EVs were contaminated with infectious viral particles. In this study, the cells that harbor subgenomic replicon derived from the Japanese encephalitis virus and dengue virus without producing any replication-competent viruses were employed as the EV donor. It was demonstrated that the EVs in the culture supernatants of those cells were able to transfer the replicon genome to other cells of various types. It was also shown that the EVs were incorporated by the recipient cells primarily through macropinocytosis after interaction with CD33 and Tim-1/Tim-4 on HeLa and K562 cells, respectively. Since the methods used in this study are free from contamination with infectious viral particles, it is unequivocally indicated that the flavivirus genome can be transferred by EVs from cell to cell, suggesting that this pathway, in addition to the classical receptor-mediated infection, may play some roles in the viral propagation and pathogenesis.

Keywords: Japanese encephalitis virus; dengue virus; exosome; extracellular vesicle; replicon.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Line
  • Dengue Virus / genetics
  • Dengue Virus / physiology
  • Encephalitis Virus, Japanese* / genetics
  • Encephalitis Virus, Japanese* / physiology
  • Extracellular Vesicles* / genetics
  • Extracellular Vesicles* / metabolism
  • Extracellular Vesicles* / virology
  • Flavivirus / genetics
  • Flavivirus / physiology
  • Genome, Viral*
  • HeLa Cells
  • Humans
  • K562 Cells
  • Replicon* / genetics
  • Subgenomic RNA
  • Viral Proteins* / genetics
  • Viral Proteins* / metabolism
  • Virus Replication

Substances

  • Viral Proteins
  • Subgenomic RNA

Grants and funding

This study was supported by the AMED under grant numbers JP20fk0108123 and JP23fk0108656 as well as JSPS KAKENHI under grant number JP21K08512.