CD8+ T-cell responses towards conserved influenza B virus epitopes across anatomical sites and age

Nat Commun. 2024 Apr 29;15(1):3387. doi: 10.1038/s41467-024-47576-y.

Abstract

Influenza B viruses (IBVs) cause substantive morbidity and mortality, and yet immunity towards IBVs remains understudied. CD8+ T-cells provide broadly cross-reactive immunity and alleviate disease severity by recognizing conserved epitopes. Despite the IBV burden, only 18 IBV-specific T-cell epitopes restricted by 5 HLAs have been identified currently. A broader array of conserved IBV T-cell epitopes is needed to develop effective cross-reactive T-cell based IBV vaccines. Here we identify 9 highly conserved IBV CD8+ T-cell epitopes restricted to HLA-B*07:02, HLA-B*08:01 and HLA-B*35:01. Memory IBV-specific tetramer+CD8+ T-cells are present within blood and tissues. Frequencies of IBV-specific CD8+ T-cells decline with age, but maintain a central memory phenotype. HLA-B*07:02 and HLA-B*08:01-restricted NP30-38 epitope-specific T-cells have distinct T-cell receptor repertoires. We provide structural basis for the IBV HLA-B*07:02-restricted NS1196-206 (11-mer) and HLA-B*07:02-restricted NP30-38 epitope presentation. Our study increases the number of IBV CD8+ T-cell epitopes, and defines IBV-specific CD8+ T-cells at cellular and molecular levels, across tissues and age.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • CD8-Positive T-Lymphocytes* / immunology
  • Child
  • Child, Preschool
  • Cross Reactions / immunology
  • Epitopes, T-Lymphocyte* / immunology
  • Female
  • HLA-B Antigens / immunology
  • Humans
  • Immunologic Memory / immunology
  • Influenza B virus* / immunology
  • Influenza, Human* / immunology
  • Influenza, Human* / virology
  • Male
  • Middle Aged
  • Young Adult

Substances

  • Epitopes, T-Lymphocyte
  • HLA-B Antigens