Identification and characterization of the capsule depolymerase Dpo27 from phage IME-Ap7 specific to Acinetobacter pittii

Front Cell Infect Microbiol. 2024 May 14:14:1373052. doi: 10.3389/fcimb.2024.1373052. eCollection 2024.

Abstract

Among the Acinetobacter genus, Acinetobacter pittii stands out as an important opportunistic infection causative agent commonly found in hospital settings, which poses a serious threat to human health. Recently, the high prevalence of carbapenem-resistant A. pittii isolates has created significant therapeutic challenges for clinicians. Bacteriophages and their derived enzymes are promising therapeutic alternatives or adjuncts to antibiotics effective against multidrug-resistant bacterial infections. However, studies investigating the depolymerases specific to A. pittii strains are scarce. In this study, we identified and characterized a capsule depolymerase, Dpo27, encoded by the bacteriophage IME-Ap7, which targets A. pittii. A total of 23 clinical isolates of Acinetobacter spp. were identified as A. pittii (21.91%, 23/105), and seven A. pittii strains with various K locus (KL) types (KL14, KL32, KL38, KL111, KL163, KL207, and KL220) were used as host bacteria for phage screening. The lytic phage IME-Ap7 was isolated using A. pittii 7 (KL220) as an indicator bacterium and was observed for depolymerase activity. A putative tail fiber gene encoding a polysaccharide-degrading enzyme (Dpo27) was identified and expressed. The results of the modified single-spot assay showed that both A. pittii 7 and 1492 were sensitive to Dpo27, which was assigned the KL220 type. After incubation with Dpo27, A. pittii strain was susceptible to killing by human serum; moreover, the protein displayed no hemolytic activity against erythrocytes. Furthermore, the protein exhibited sustained activity across a wide pH range (5.0-10.0) and at temperatures between 20 and 50°C. In summary, the identified capsule depolymerase Dpo27 holds promise as an alternative treatment for combating KL220-type A. pittii infections.

Keywords: Acinetobacter pittii; anti-virulence; bacteriophage; capsular type; capsule depolymerase.

MeSH terms

  • Acinetobacter Infections* / microbiology
  • Acinetobacter* / drug effects
  • Acinetobacter* / enzymology
  • Acinetobacter* / genetics
  • Acinetobacter* / virology
  • Bacterial Capsules / genetics
  • Bacterial Capsules / metabolism
  • Bacteriophages* / enzymology
  • Bacteriophages* / genetics
  • Bacteriophages* / isolation & purification
  • Glycoside Hydrolases* / genetics
  • Glycoside Hydrolases* / metabolism
  • Humans

Substances

  • capsular-polysaccharide galactohydrolase
  • Glycoside Hydrolases

Grants and funding

The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This project was supported by the National Natural Science Foundation of China (grant no. 82102446) and the Beijing Chao-Yang Hospital Golden Seeds Foundation (grant no. CYJZ202111).