Engineered uterine primary myometrial cells with high-mobility group AT-hook 2 overexpression display a leiomyoma-like transcriptional and epigenomic phenotype

F S Sci. 2024 Nov;5(4):352-368. doi: 10.1016/j.xfss.2024.07.008. Epub 2024 Jul 27.

Abstract

Objective: To determine if engineered high-mobility group AT-hook 2 (HMGA2) overexpressing uterine primary myometrial cells recapitulate the transcriptional and epigenomic features of HMGA2-subtype leiomyomas.

Design: Isolated primary, "normal" myometrial cells from three patients were engineered to overexpress HMGA2 to determine how HMGA2 establishes transcriptomic and epigenomic features of HMGA2-overexpressing leiomyoma.

Setting: Academic research laboratory.

Patient(s): Primary myometrial cells were isolated from normal myometrium obtained from three patients undergoing hysterectomy.

Intervention(s): Not applicable.

Main outcome measure(s): Determined genome-wide transcriptomic and epigenomic features of engineered HMGA2-overexpressing uterine primary myometrial cells.

Result(s): Engineered HMGA2-V5-overexpressing primary myometrial cells approximated the HMGA2 expression level observed in HMGA2-overexpression subtype leiomyoma. High-mobility group AT-hook 2-V5 expression resulted in differential expression of 1,612 genes (false discovery rate [FDR] < 0.05) that were found to be enriched in pathways associated with leiomyoma formation, including extracellular matrix organization. Comparative gene expression analysis between HMGA2-V5 engineered primary cells and HMGA2-overexpression subtype leiomyoma revealed significant overlap of differentially expressed genes. Mechanistically, HMGA2-V5 overexpression resulted in 41,323 regions with differential H3K27ac deposition (FDR < 0.05) and 205,605 regions of altered chromatin accessibility (FDR < 0.05). Transcription factor binding site analysis implicated the AP-1 family of transcription factors.

Conclusion(s): High-mobility group AT-hook 2 overexpression induces leiomyoma-like transcriptomic and epigenomic modulations in myometrial cells.

Keywords: HMGA2; Leiomyoma; epigenomics; fibroids; transcriptome.

MeSH terms

  • Epigenomics
  • Female
  • Gene Expression Regulation, Neoplastic
  • HMGA2 Protein* / genetics
  • HMGA2 Protein* / metabolism
  • Humans
  • Leiomyoma* / genetics
  • Leiomyoma* / metabolism
  • Leiomyoma* / pathology
  • Myometrium* / metabolism
  • Myometrium* / pathology
  • Phenotype
  • Uterine Neoplasms* / genetics
  • Uterine Neoplasms* / metabolism
  • Uterine Neoplasms* / pathology

Substances

  • HMGA2 Protein
  • HMGA2 protein, human