The therapeutic implications of all-in-one AAV-delivered epigenome-editing platform in neurodegenerative disorders

Nat Commun. 2024 Aug 23;15(1):7259. doi: 10.1038/s41467-024-50515-6.

Abstract

Safely and efficiently controlling gene expression is a long-standing goal of biomedical research, and CRISPR/Cas system can be harnessed to create powerful tools for epigenetic editing. Adeno-associated-viruses (AAVs) represent the delivery vehicle of choice for therapeutic platform. However, their small packaging capacity isn't suitable for large constructs including most CRISPR/dCas9-effector vectors. Thus, AAV-based CRISPR/Cas systems have been delivered via two separate viral vectors. Here we develop a compact CRISPR/dCas9-based repressor system packaged in AAV as a single optimized vector. The system comprises the small Staphylococcus aureus (Sa)dCas9 and an engineered repressor molecule, a fusion of MeCP2's transcription repression domain (TRD) and KRAB. The dSaCas9-KRAB-MeCP2(TRD) vector platform repressed robustly and sustainably the expression of multiple genes-of-interest, in vitro and in vivo, including ApoE, the strongest genetic risk factor for late onset Alzheimer's disease (LOAD). Our platform broadens the CRISPR/dCas9 toolset available for transcriptional manipulation of gene expression in research and therapeutic settings.

MeSH terms

  • Alzheimer Disease / genetics
  • Alzheimer Disease / therapy
  • Animals
  • Apolipoproteins E / genetics
  • CRISPR-Cas Systems* / genetics
  • Dependovirus* / genetics
  • Epigenesis, Genetic
  • Epigenome
  • Gene Editing* / methods
  • Genetic Therapy / methods
  • Genetic Vectors* / genetics
  • HEK293 Cells
  • Humans
  • Methyl-CpG-Binding Protein 2 / genetics
  • Methyl-CpG-Binding Protein 2 / metabolism
  • Mice
  • Neurodegenerative Diseases / genetics
  • Neurodegenerative Diseases / therapy
  • Staphylococcus aureus / genetics

Substances

  • Methyl-CpG-Binding Protein 2
  • Apolipoproteins E