Hijackers, hitchhikers, or co-drivers? The mysteries of mobilizable genetic elements

PLoS Biol. 2024 Aug 29;22(8):e3002796. doi: 10.1371/journal.pbio.3002796. eCollection 2024 Aug.

Abstract

Mobile genetic elements shape microbial gene repertoires and populations. Recent results reveal that many, possibly most, microbial mobile genetic elements require helpers to transfer between genomes, which we refer to as Hitcher Genetic Elements (hitchers or HGEs). They may be a large fraction of pathogenicity and resistance genomic islands, whose mechanisms of transfer have remained enigmatic for decades. Together with their helper elements and their bacterial hosts, hitchers form tripartite networks of interactions that evolve rapidly within a parasitism-mutualism continuum. In this emerging view of microbial genomes as communities of mobile genetic elements many questions arise. Which elements are being moved, by whom, and how? How often are hitchers costly hyper-parasites or beneficial mutualists? What is the evolutionary origin of hitchers? Are there key advantages associated with hitchers' lifestyle that justify their unexpected abundance? And why are hitchers systematically smaller than their helpers? In this essay, we start answering these questions and point ways ahead for understanding the principles, origin, mechanisms, and impact of hitchers in bacterial ecology and evolution.

MeSH terms

  • Bacteria / genetics
  • Evolution, Molecular
  • Gene Transfer, Horizontal*
  • Genome, Bacterial
  • Genomic Islands
  • Interspersed Repetitive Sequences / genetics
  • Symbiosis / genetics

Grants and funding

This work was supported by a grant from INCEPTION (ANR-16-CONV-0005) and IBEID Labex (ANR-10-LABX-62-IBEID) to EPCR, a grant Agence Nationale de la Recherche (ANR) LBX-62 IBEID AAP BOURSE S2I ROCHA to JMS and a grant Agence Nationale de la Recherche (ANR) 23 CE20 0046 01 TRIADE to JMS, and a grant European Commission (HORIZON-MSCA-2021-PF-01–01 EvoPlas-101062386) to MAA. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.