Phospholipid scrambling induced by an ion channel/metabolite transporter complex

Nat Commun. 2024 Aug 31;15(1):7566. doi: 10.1038/s41467-024-51939-w.

Abstract

Cells establish the asymmetrical distribution of phospholipids and alter their distribution by phospholipid scrambling (PLS) to adapt to environmental changes. Here, we demonstrate that a protein complex, consisting of the ion channel Tmem63b and the thiamine transporter Slc19a2, induces PLS upon calcium (Ca2+) stimulation. Through revival screening using a CRISPR sgRNA library on high PLS cells, we identify Tmem63b as a PLS-inducing factor. Ca2+ stimulation-mediated PLS is suppressed by deletion of Tmem63b, while human disease-related Tmem63b mutants induce constitutive PLS. To search for a molecular link between Ca2+ stimulation and PLS, we perform revival screening on Tmem63b-overexpressing cells, and identify Slc19a2 and the Ca2+-activated K+ channel Kcnn4 as PLS-regulating factors. Deletion of either of these genes decreases PLS activity. Biochemical screening indicates that Tmem63b and Slc19a2 form a heterodimer. These results demonstrate that a Tmem63b/Slc19a2 heterodimer induces PLS upon Ca2+ stimulation, along with Kcnn4 activation.

MeSH terms

  • Animals
  • CRISPR-Cas Systems
  • Calcium* / metabolism
  • HEK293 Cells
  • Humans
  • Ion Channels / genetics
  • Ion Channels / metabolism
  • Phospholipid Transfer Proteins* / genetics
  • Phospholipid Transfer Proteins* / metabolism
  • Phospholipids* / metabolism

Substances

  • Calcium
  • Phospholipid Transfer Proteins
  • Phospholipids
  • Ion Channels